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dbVar

Database of genomic structural variation

nsv7092460

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,000

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 249 SVs from 32 studies. See in: genome view

Submitted genomic73,954,101-73,957,100

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7092460	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	73,954,101	73,957,100
nsv7092460	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	73,173,936	73,176,935

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18453417	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18453417	Submitted genomic		NC_000023.11:g.739 54101_73957100del	GRCh38 (hg38)		NC_000023.11	ChrX	73,954,101	73,957,100
nssv18453417	Remapped	Perfect	NC_000023.10:g.731 73936_73176935del	GRCh37.p13	First Pass	NC_000023.10	ChrX	73,173,936	73,176,935

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18453417	0.004	875	216691

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