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nsv883658

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:19,900

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 1604 SVs from 101 studies. See in: genome view    
Remapped(Score: Perfect):29,890,188-29,910,087Question Mark
Overlapping variant regions from other studies: 704 SVs from 38 studies. See in: genome view    
Remapped(Score: Pass):1,152,239-1,166,421Question Mark
Overlapping variant regions from other studies: 1604 SVs from 101 studies. See in: genome view    
Remapped(Score: Perfect):29,857,965-29,877,864Question Mark
Overlapping variant regions from other studies: 704 SVs from 38 studies. See in: genome view    
Remapped(Score: Pass):1,157,859-1,172,041Question Mark
Overlapping variant regions from other studies: 702 SVs from 30 studies. See in: genome view    
Submitted genomic29,965,944-29,985,843Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv883658RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr629,890,18829,890,88329,908,66329,910,087
nsv883658RemappedPassGRCh38.p12ALT_REF_LOCI_4Second PassNT_167246.2Chr6|NT_16
7246.2		-1,152,2391,166,4211,166,421
nsv883658RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr629,857,96529,858,66029,876,44029,877,864
nsv883658RemappedPassGRCh37.p13ALT_REF_LOCI_4Second PassNT_167246.1Chr6|NT_16
7246.1		-1,157,8591,172,0411,172,041
nsv883658Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr629,965,94429,966,63929,984,41929,985,843

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1553589copy number gainMS20196SNP arraySNP genotyping analysis15
nssv1554005copy number gainMS20510SNP arraySNP genotyping analysis8

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1553589RemappedPassNT_167246.2:g.(?_1
152239)_(1166421_1
166421)dup		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		-1,152,2391,166,4211,166,421
nssv1554005RemappedPassNT_167246.2:g.(?_1
152239)_(1166421_1
166421)dup		GRCh38.p12Second PassNT_167246.2Chr6|NT_16
7246.2		-1,152,2391,166,4211,166,421
nssv1553589RemappedPerfectNC_000006.12:g.(29
890188_29890883)_(
29908663_29910087)
dup		GRCh38.p12First PassNC_000006.12Chr629,890,18829,890,88329,908,66329,910,087
nssv1554005RemappedPerfectNC_000006.12:g.(29
890188_29890883)_(
29908663_29910087)
dup		GRCh38.p12First PassNC_000006.12Chr629,890,18829,890,88329,908,66329,910,087
nssv1553589RemappedPassNT_167246.1:g.(?_1
157859)_(1172041_1
172041)dupNT_16724
6.1:g.(?_1157859)_
(1172041_1172041)d
up		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		-1,157,8591,172,0411,172,041
nssv1554005RemappedPassNT_167246.1:g.(?_1
157859)_(1172041_1
172041)dupNT_16724
6.1:g.(?_1157859)_
(1172041_1172041)d
up		GRCh37.p13Second PassNT_167246.1Chr6|NT_16
7246.1		-1,157,8591,172,0411,172,041
nssv1553589RemappedPerfectNC_000006.11:g.(29
857965_29858660)_(
29876440_29877864)
dup		GRCh37.p13First PassNC_000006.11Chr629,857,96529,858,66029,876,44029,877,864
nssv1554005RemappedPerfectNC_000006.11:g.(29
857965_29858660)_(
29876440_29877864)
dup		GRCh37.p13First PassNC_000006.11Chr629,857,96529,858,66029,876,44029,877,864
nssv1553589Submitted genomicNC_000006.10:g.(29
965944_29966639)_(
29984419_29985843)
dup		NCBI36 (hg18)NC_000006.10Chr629,965,94429,966,63929,984,41929,985,843
nssv1554005Submitted genomicNC_000006.10:g.(29
965944_29966639)_(
29984419_29985843)
dup		NCBI36 (hg18)NC_000006.10Chr629,965,94429,966,63929,984,41929,985,843

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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