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dbVar

Database of genomic structural variation

nsv910057

Organism: Homo sapiens

Study:nstd71 (Xu et al. 2011)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI36 (hg18)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:79,457

Publication(s):Xu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1230 SVs from 78 studies. See in: genome view

Remapped(Score: Perfect):79,829,759-79,909,215

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv910057	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000018.10	Chr18	79,829,759	79,865,549	79,897,319	79,909,215
nsv910057	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	77,589,759	77,625,549	77,657,319	77,669,215
nsv910057	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000018.8	Chr18	75,690,747	75,726,537	75,758,307	75,770,203

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1574142	copy number loss	IS33514	SNP array	SNP genotyping analysis	56
nssv1595435	copy number loss	IS40230	SNP array	SNP genotyping analysis	131

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv1574142	Remapped	Perfect	NC_000018.10:g.(79 829759_79865549)_( 79897319_79909215) del	GRCh38.p12	First Pass	NC_000018.10	Chr18	79,829,759	79,865,549	79,897,319	79,909,215
nssv1595435	Remapped	Perfect	NC_000018.10:g.(79 829759_79865549)_( 79897319_79909215) del	GRCh38.p12	First Pass	NC_000018.10	Chr18	79,829,759	79,865,549	79,897,319	79,909,215
nssv1574142	Remapped	Perfect	NC_000018.9:g.(775 89759_77625549)_(7 7657319_77669215)d el	GRCh37.p13	First Pass	NC_000018.9	Chr18	77,589,759	77,625,549	77,657,319	77,669,215
nssv1595435	Remapped	Perfect	NC_000018.9:g.(775 89759_77625549)_(7 7657319_77669215)d el	GRCh37.p13	First Pass	NC_000018.9	Chr18	77,589,759	77,625,549	77,657,319	77,669,215
nssv1574142	Submitted genomic		NC_000018.8:g.(756 90747_75726537)_(7 5758307_75770203)d el	NCBI36 (hg18)		NC_000018.8	Chr18	75,690,747	75,726,537	75,758,307	75,770,203
nssv1595435	Submitted genomic		NC_000018.8:g.(756 90747_75726537)_(7 5758307_75770203)d el	NCBI36 (hg18)		NC_000018.8	Chr18	75,690,747	75,726,537	75,758,307	75,770,203

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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