nsv959342
- Organism: Homo sapiens
- Study:nstd86 (Poultney et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:54,259
- Publication(s):Poultney et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 309 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 310 SVs from 53 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv959342 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 41,663,605 | 41,717,863 |
| nsv959342 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 41,705,096 | 41,759,355 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3021361 | deletion | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv3021361 | Remapped | Good | NC_000003.12:g.(41 615719_41615719)_( 41754359_41754359) del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 41,615,719 | 41,615,719 | 41,754,359 | 41,754,359 |
| nssv3021361 | Submitted genomic | NC_000003.11:g.(41 657210_41705096)_( 41759355_41795851) del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 41,657,210 | 41,705,096 | 41,759,355 | 41,795,851 |