GPL14119[Accession] - GEO DataSets - NCBI

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Select item 2000312421.

Fingerprinting the Asterid species using subtracted diversity array reveals novel species-specific sequences.

(Submitter supplied) Asterids is one of the major plant clades comprising of many commercially important medicinal species. One of the major concerns in medicinal plant industry is adulteration/contamination resulting from misidentification of herbal plants. This study reports the construction and validation of a microarray capable of fingerprinting medicinally important species from the Asterids clade.

Organism:: Cornus; Achillea millefolium; Impatiens; Tetrapanax papyrifer; Scrophularia nodosa; Gardenia jasminoides; Forsythia suspensa; Withania somnifera; Ilex paraguariensis; Embryophyta; Digitalis purpurea; Platycodon grandiflorus; Symphytum; Codonopsis; Valeriana officinalis; Taraxacum officinale; Lonicera japonica; Lycium barbarum; Leonurus cardiaca; Sambucus nigra; Camellia sinensis; Coffea arabica; Angelica archangelica; Vitex agnus-castus; Trachelospermum jasminoides; asterids; Rehmannia glutinosa

Type:: Genome variation profiling by array

Platform:: GPL14119
27 Samples

Download data: TXT

Series

Accession:: GSE31242

ID:: 200031242

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000141192.

Asterids-specific array

(Submitter supplied) specific for all species belonging to Asterids clade of plants Protocol: Plant material and genomic DNA extraction : Leaf tissues of 67 species representing the Asterid clade (AC) and 104 species representing the non-asterid angiosperms and non-angiosperms (NA) were obtained from the herbarium at Southern Cross University Plant Science, NSW, Australia. High quality genomic DNA (gDNA) was extracted from these specimens using DNeasy® Plant Mini Kit (Qiagen Inc., Australia). more...

Organism:: asterids

1 Series
27 Samples

Platform

Accession:: GPL14119

ID:: 100014119

Select item 3007744693.

Achellia millefolium replicate 1 & 2

Organism:: Achillea millefolium

Source name:: Achillea millefolium

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774469

ID:: 300774469

Select item 3007744684.

Angelica archangelica replicate 1 & 2

Organism:: Angelica archangelica

Source name:: Angelica archangelica

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774468

ID:: 300774468

Select item 3007744675.

Camellia sinensis replicate 1 & 2

Organism:: Camellia sinensis

Source name:: Camellia sinensis

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774467

ID:: 300774467

Select item 3007744666.

Coffee arabica replicate 1 & 2

Organism:: Coffea arabica

Source name:: Coffea arabica

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774466

ID:: 300774466

Select item 3007744657.

Ilex paraguariensis replicate 1 & 2

Organism:: Ilex paraguariensis

Source name:: Ilex paraguariensis

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774465

ID:: 300774465

Select item 3007744648.

Leonurus cardiaca replicate 1 & 2

Organism:: Leonurus cardiaca

Source name:: Leonurus cardiaca

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774464

ID:: 300774464

Select item 3007744639.

Sambuscus nigra replicate 1 & 2

Organism:: Sambucus nigra

Source name:: Sambucus nigra

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774463

ID:: 300774463

Select item 30077446210.

Schrophularia nodosa replicate 1 & 2

Organism:: Scrophularia nodosa

Source name:: Scrophularia nodosa

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774462

ID:: 300774462

Select item 30077446111.

Vitex agnus-custus replicate 1 & 2

Organism:: Vitex agnus-castus

Source name:: Vitex agnus-castus

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774461

ID:: 300774461

Select item 30077446012.

Withania somnifera replicate 1 & 2

Organism:: Withania somnifera

Source name:: Withania somnifera

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774460

ID:: 300774460

Select item 30077445913.

Forsythia suspensa replicate 1 & 2

Organism:: Forsythia suspensa

Source name:: Forsythia suspensa

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774459

ID:: 300774459

Select item 30077445814.

Rehmannia glutinosa replicate 1 & 2

Organism:: Rehmannia glutinosa

Source name:: Rehmannia glutinosa

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774458

ID:: 300774458

Select item 30077445715.

Symptum spp - replicate 1 & 2

Organism:: Symphytum

Source name:: Symphytum

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774457

ID:: 300774457

Select item 30077445616.

Digitalis purpurea - replicate 1 & 2

Organism:: Digitalis purpurea

Source name:: Digitalis purpurea

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774456

ID:: 300774456

Select item 30077445517.

Lycium barbarum - replicate 1 & 2

Organism:: Lycium barbarum

Source name:: Lycium barbarum

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774455

ID:: 300774455

Select item 30077445418.

Codonopsis spp - replicate 1 & 2

Organism:: Codonopsis

Source name:: Codonopsis

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774454

ID:: 300774454

Select item 30077445319.

Taraxacum officinale - replicate 1 & 2

Organism:: Taraxacum officinale

Source name:: Taraxacum officinale

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774453

ID:: 300774453

Select item 30077445220.

Tracheospermum jasminoides - replicate 1 & 2

Organism:: Trachelospermum jasminoides

Source name:: Trachelospermum jasminoides

Platform:: GPL14119
Series:: GSE31242

Download data: TXT

Sample

Accession:: GSM774452

ID:: 300774452

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