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Items: 8

1.

RNAseq analyses of pathogenic Burkholderia glumae under in vitro and in vivo conditions

(Submitter supplied) We analyzed B. glumae transcriptome from infected rice tissue using an RNAseq technique. To identify unique expression of B. glumae genes within rice tissues, we compared in vivo transcriptome data of B. glumae to in vitro data. To accomplish this, we analyzed differentially expressed genes (DEGs) and identified 2,906 transcripts that were significantly altered.
Organism:
Burkholderia glumae BGR1
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18590
6 Samples
Download data: TXT
Series
Accession:
GSE56958
ID:
200056958

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Burkholderia glumae BGR1)

Organism:
Burkholderia glumae BGR1
1 Series
6 Samples
Download data
Platform
Accession:
GPL18590
ID:
100018590

3.

in vitro rep3

Organism:
Burkholderia glumae BGR1
Source name:
Bacteria culture, BGR1, 6hr
Platform:
GPL18590
Series:
GSE56958
Download data: TXT
Sample
Accession:
GSM1444490
ID:
301444490

SRA Run Selector

4.

in vivo rep3

Organism:
Burkholderia glumae BGR1
Source name:
In rice, BGR1
Platform:
GPL18590
Series:
GSE56958
Download data: TXT
Sample
Accession:
GSM1372155
ID:
301372155

SRA Run Selector

5.

in vivo rep2

Organism:
Burkholderia glumae BGR1
Source name:
In rice, BGR1
Platform:
GPL18590
Series:
GSE56958
Download data: TXT
Sample
Accession:
GSM1372154
ID:
301372154

SRA Run Selector

6.

in vivo rep1

Organism:
Burkholderia glumae BGR1
Source name:
In rice, BGR1
Platform:
GPL18590
Series:
GSE56958
Download data: TXT
Sample
Accession:
GSM1372153
ID:
301372153

SRA Run Selector

7.

in vitro rep2

Organism:
Burkholderia glumae BGR1
Source name:
Bacteria culture, BGR1, 6hr
Platform:
GPL18590
Series:
GSE56958
Download data: TXT
Sample
Accession:
GSM1372152
ID:
301372152

SRA Run Selector

8.

in vitro rep1

Organism:
Burkholderia glumae BGR1
Source name:
Bacteria culture, BGR1, 6hr
Platform:
GPL18590
Series:
GSE56958
Download data: TXT
Sample
Accession:
GSM1372151
ID:
301372151

SRA Run Selector

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