GPL19931[Accession] - GEO DataSets - NCBI

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Select item 2000672021.

Transcriptomes of ΔrelAspoT and ΔdksA mutants of Haemophilus ducreyi in mid-log, transition, and stationary phase

(Submitter supplied) To better understand the role of the (p)ppGpp-mediated stringent response in control of H. ducreyi virulence determinants, here we defined genes potentially regulated by either (p)ppGpp or DksA by using RNA-seq. We were able to show that loss of either (p)ppGpp or DksA resulted in dysregulation of multiple genes including several known virulence determinants. We also show that loss of (p)ppGpp or DksA resulted in differential expression of putative H. more...

Organism:: [Haemophilus] ducreyi 35000HP

Type:: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing

Platform:: GPL19931
36 Samples

Download data: XLSX

Series

Accession:: GSE67202

ID:: 200067202

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000199312.

Illumina HiSeq 2500 (Haemophilus ducreyi 35000HP)

Organism:: [Haemophilus] ducreyi 35000HP

1 Series
36 Samples

Platform

Accession:: GPL19931

ID:: 100019931

Select item 3016424803.

dksA 16hr Rep 4

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642480

ID:: 301642480

SRA Run Selector

Select item 3016424794.

dksA 16hr Rep 3

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642479

ID:: 301642479

SRA Run Selector

Select item 3016424785.

dksA 16hr Rep 2

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642478

ID:: 301642478

SRA Run Selector

Select item 3016424776.

dksA 16hr Rep 1

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642477

ID:: 301642477

SRA Run Selector

Select item 3016424767.

relAspoT 16hr Rep 4

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642476

ID:: 301642476

SRA Run Selector

Select item 3016424758.

relAspoT 16hr Rep 3

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642475

ID:: 301642475

SRA Run Selector

Select item 3016424749.

relAspoT 16hr Rep 2

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642474

ID:: 301642474

SRA Run Selector

Select item 30164247310.

relAspoT 16hr Rep 1

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642473

ID:: 301642473

SRA Run Selector

Select item 30164247211.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642472

ID:: 301642472

SRA Run Selector

Select item 30164247112.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642471

ID:: 301642471

SRA Run Selector

Select item 30164247013.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642470

ID:: 301642470

SRA Run Selector

Select item 30164246914.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642469

ID:: 301642469

SRA Run Selector

Select item 30164246815.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642468

ID:: 301642468

SRA Run Selector

Select item 30164246716.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642467

ID:: 301642467

SRA Run Selector

Select item 30164246617.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642466

ID:: 301642466

SRA Run Selector

Select item 30164246518.

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642465

ID:: 301642465

SRA Run Selector

Select item 30164246419.

relAspoT 8hr Rep 4

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642464

ID:: 301642464

SRA Run Selector

Select item 30164246320.

relAspoT 8hr Rep 3

Organism:: [Haemophilus] ducreyi 35000HP

Source name:: bacteria

Platform:: GPL19931
Series:: GSE67202

Sample

Accession:: GSM1642463

ID:: 301642463

SRA Run Selector

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