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Items: 1 to 20 of 69

1.

Pan-genome and methylome analysis reveals the diversity of restriction/modification systems in the gut commensal Bifidobacterium breve.

(Submitter supplied) Bifidobacterium breve represents one of the most abundant (bifido)bacterial species in the gastro-intestinal tract of (breast-fed) infants, where their presence is believed to be beneficial. In the present study whole genome sequencing, employing PacBio’s Single Molecule, Real-Time (SMRT) sequencing platform, combined with comparative genome analysis allowed the most extensive genetic investigation of this taxon. more...
Organism:
Bifidobacterium breve; Bifidobacterium breve UCC2003
Type:
Genome variation profiling by array
Platforms:
GPL8878 GPL13210
66 Samples
Download data: TXT
Series
Accession:
GSE104927
ID:
200104927

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Agilent-020573 Bifidobacterium breve UCC2003 Agilent 4x44k format

(Submitter supplied) Custom 4x44k microarray design of B. breve UCC2003 with three unique probes replicated 5 times per 1 kb of gene sequence. Protocol: Chemical In-situ oligonucleotide synthesis.
Organism:
Bifidobacterium breve UCC2003
7 Series
96 Samples
Download data
Platform
Accession:
GPL13210
ID:
100013210

3.

Bifidobacterium breve UCC2003 Agilent 2x11K format

(Submitter supplied) Chemical In-situ oligonucleotide synthesis.
Organism:
Bifidobacterium breve UCC2003
18 Series
77 Samples
Download data
Platform
Accession:
GPL8878
ID:
100008878

4.

B. breve UCC2003 grown on modified rogosa media v. B. breve NRBB57 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810184
ID:
302810184

5.

B. breve UCC2003 grown on modified rogosa media v. B. breve DRBB31 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810183
ID:
302810183

6.

B. breve UCC2003 grown on modified rogosa media v. B. breve DRBB30 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810182
ID:
302810182

7.

B. breve UCC2003 grown on modified rogosa media v. B. breve DRBB29 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810181
ID:
302810181

8.

B. breve UCC2003 grown on modified rogosa media v. B. breve DRBB28 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810180
ID:
302810180

9.

B. breve UCC2003 grown on modified rogosa media v. B. breve DRBB27 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810179
ID:
302810179

10.

B. breve UCC2003 grown on modified rogosa media v. B. breve DRBB26 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810178
ID:
302810178

11.

B. breve UCC2003 grown on modified rogosa media v. B. breve DRBB25 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810177
ID:
302810177

12.

B. breve UCC2003 grown on modified rogosa media v. B. breve 215W4-47a grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810176
ID:
302810176

13.

B. breve UCC2003 grown on modified rogosa media v. B. breve 200W4-13 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810175
ID:
302810175

14.

B. breve UCC2003 grown on modified rogosa media v. B. breve 180W8-3 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810174
ID:
302810174

15.

B. breve UCC2003 grown on modified rogosa media v. B. breve 144W4-15 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810173
ID:
302810173

16.

B. breve UCC2003 grown on modified rogosa media v. B. breve 139W4-23 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810172
ID:
302810172

17.

B. breve UCC2003 grown on modified rogosa media v. B. breve 082W4-8 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810171
ID:
302810171

18.

B. breve UCC2003 grown on modified rogosa media v. B. breve 165W4-19 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810170
ID:
302810170

19.

B. breve UCC2003 grown on modified rogosa media v. B. breve 017W4-39 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810169
ID:
302810169

20.

B. breve UCC2003 grown on modified rogosa media v. B. breve 017W4-21 grown on modified rogosa media.

Organism:
Bifidobacterium breve
Source name:
B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)
Platform:
GPL13210
Series:
GSE104927
Download data: TXT
Sample
Accession:
GSM2810168
ID:
302810168

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