GSE106627[Accession] - GEO DataSets - NCBI

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Items: 13

Select item 2001066271.

Coordinated regulation of starch synthesis by microRNAs and DNA methylation [miRNA-seq]

(Submitter supplied) Starch synthesis is an essential feature for crops, but its regulatory mechanism has been largely restricted to transcription factors. Starch synthesis parallels the endosperm development in maize. we obtained transcriptome, small RNAome and DNA methylome data from the multiple developing stages of endosperms, as well as kernel and leaf, via applying RNA-seq, sRNA-seq and BS-seq technologies. We demonstrated that genome-wide gene expression makes a sharp transition at the point when starch accumulation speeds between DAP 10-13, while the enriched up-regulation of starch and sucrose metabolism genes occurs earlier at DAP 9-10. more...

Organism:: Zea mays

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL13977
11 Samples

Download data: TXT

Series

Accession:: GSE106627

ID:: 200106627

SRA Run Selector

Select item 1000139772.

Illumina Genome Analyzer IIx (Zea mays)

Organism:: Zea mays

11 Series
49 Samples

Platform

Accession:: GPL13977

ID:: 100013977

Select item 3028440643.

Organism:: Zea mays

Source name:: ear leaf

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844064

ID:: 302844064

SRA Run Selector

Select item 3028440634.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844063

ID:: 302844063

SRA Run Selector

Select item 3028440625.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844062

ID:: 302844062

SRA Run Selector

Select item 3028440616.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844061

ID:: 302844061

SRA Run Selector

Select item 3028440607.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844060

ID:: 302844060

SRA Run Selector

Select item 3028440598.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844059

ID:: 302844059

SRA Run Selector

Select item 3028440589.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844058

ID:: 302844058

SRA Run Selector

Select item 30284405710.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844057

ID:: 302844057

SRA Run Selector

Select item 30284405611.

Organism:: Zea mays

Source name:: endosperm

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844056

ID:: 302844056

SRA Run Selector

Select item 30284405512.

Organism:: Zea mays

Source name:: seed

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844055

ID:: 302844055

SRA Run Selector

Select item 30284405413.

Organism:: Zea mays

Source name:: seed

Platform:: GPL13977
Series:: GSE106627 GSE106686

Sample

Accession:: GSM2844054

ID:: 302844054

SRA Run Selector

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