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Items: 6

1.

De novo assembled individual genome does not show advantage against standard reference genome: a demonstration of Chinese Han Population

(Submitter supplied) We compared standard human reference genome GRCh38 and de novo assembled reference genome HX1 in precision medicine applications for specific ethnics. In order to quantify the HX1 misassembled genes and HX1-specific contigs, we performed RNA-seq and RNC-seq on hepatocellular carcinoma cell lines (MHCC97H, MHCCLM3 and MHCCLM6) which were derived from Chinese Han individuals. In which, RNC-seq datasets of MHCC97H and MHCCLM3 had been published. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20795
4 Samples
Download data: XLSX
Series
Accession:
GSE121013
ID:
200121013

Analyze with GEO2RSRA Run Selector

2.

HiSeq X Ten (Homo sapiens)

Organism:
Homo sapiens
2093 Series
36075 Samples
Download data
Platform
Accession:
GPL20795
ID:
100020795

3.

MHCCLM6_RNC-seq

Organism:
Homo sapiens
Source name:
hepatocellular carcinoma cell line
Platform:
GPL20795
Series:
GSE121013
Download data: XLSX
Sample
Accession:
GSM3423949
ID:
303423949

SRA Run Selector

4.

MHCCLM6_RNA-seq

Organism:
Homo sapiens
Source name:
hepatocellular carcinoma cell line
Platform:
GPL20795
Series:
GSE121013
Download data: XLSX
Sample
Accession:
GSM3423948
ID:
303423948

SRA Run Selector

5.

MHCCLM3_RNA-seq

Organism:
Homo sapiens
Source name:
hepatocellular carcinoma cell line
Platform:
GPL20795
Series:
GSE121013
Download data: XLSX
Sample
Accession:
GSM3423947
ID:
303423947

SRA Run Selector

6.

MHCC97H_RNA-seq

Organism:
Homo sapiens
Source name:
hepatocellular carcinoma cell line
Platform:
GPL20795
Series:
GSE121013
Download data: XLSX
Sample
Accession:
GSM3423946
ID:
303423946

SRA Run Selector

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