GSE138901[Accession] - GEO DataSets - NCBI

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Multidimensional gene regulatory landscape of a bacterial pathogen in plants

(Submitter supplied) Understanding the gene regulation of plant pathogens is crucial for pest control and thus global food security. An integrated understanding of bacterial gene regulation in the host is dependent on multi-omic datasets, but these are largely lacking. Here, we simultaneously characterized the transcriptome and proteome of a bacterial pathogen in plants. We found a number of bacterial processes affected by plant immunity at the transcriptome and proteome levels. more...

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Type:: Expression profiling by high throughput sequencing

Platform:: GPL27611
12 Samples

Download data: TXT

Series

Accession:: GSE138901

ID:: 200138901

PubMed Similar studies SRA Run Selector

Select item 1000276112.

Illumina HiSeq 3000 (Pseudomonas syringae pv. tomato str. DC3000)

Organism:: Pseudomonas syringae pv. tomato str. DC3000

1 Series
12 Samples

Platform

Accession:: GPL27611

ID:: 100027611

Select item 3041214403.

Pto_pad4sid2_48h_3

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121440

ID:: 304121440

SRA Run Selector

Select item 3041214394.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121439

ID:: 304121439

SRA Run Selector

Select item 3041214385.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121438

ID:: 304121438

SRA Run Selector

Select item 3041214376.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121437

ID:: 304121437

SRA Run Selector

Select item 3041214367.

Pto_pad4sid2_48h_2

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121436

ID:: 304121436

SRA Run Selector

Select item 3041214358.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121435

ID:: 304121435

SRA Run Selector

Select item 3041214349.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121434

ID:: 304121434

SRA Run Selector

Select item 30412143310.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121433

ID:: 304121433

SRA Run Selector

Select item 30412143211.

Pto_pad4sid2_48h_1

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121432

ID:: 304121432

SRA Run Selector

Select item 30412143112.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121431

ID:: 304121431

SRA Run Selector

Select item 30412143013.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121430

ID:: 304121430

SRA Run Selector

Select item 30412142914.

Organism:: Pseudomonas syringae pv. tomato str. DC3000

Source name:: Bacteria isolated from Arabidopsis thaliana

Platform:: GPL27611
Series:: GSE138901

Sample

Accession:: GSM4121429

ID:: 304121429

SRA Run Selector

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