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Items: 7

1.

Single cell RNA-seq revealed different cell types induced by loss of ARID1A in undifferentiated and differentiation (day 10) H9 hESCs.

(Submitter supplied) We reported loss of ARID1A promoted neurogenesis and inhibited cardiogenesis. Under microscopy, we observed that spontaneously differentiated cells were induced in ARID1A KO H9 hESCs cultured in mTesR medium. After cardiac differentiation for 10 days, we also observed the cell types were totally different between WT and ARID1A KO cells. We did not know what cells types were. Here scRNA-seq were used to identify the cell types in WT H9 hESCs and ARID1A KO H9 hESCs.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL24676 GPL18573
4 Samples
Download data: TAR
Series
Accession:
GSE139342
ID:
200139342
2.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
3.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
4.

ARID1A KO_undiff_scRNA-seq

Organism:
Homo sapiens
Source name:
hESCs H9 cells
Platform:
GPL18573
Series:
GSE139342 GSE139343
Download data: TAR
Sample
Accession:
GSM4138490
ID:
304138490
5.

WT_undiff_scRNA-seq

Organism:
Homo sapiens
Source name:
hESCs H9 cells
Platform:
GPL18573
Series:
GSE139342 GSE139343
Download data: TAR
Sample
Accession:
GSM4138489
ID:
304138489
6.

ARID1A KO_diff T10_scRNA-seq

Organism:
Homo sapiens
Source name:
hESCs H9 cells-derived cells
Platform:
GPL24676
Series:
GSE139342 GSE139343
Download data: TAR
Sample
Accession:
GSM4138492
ID:
304138492
7.

WT_diff T10_scRNA-seq

Organism:
Homo sapiens
Source name:
hESCs H9 cells-derived cells
Platform:
GPL24676
Series:
GSE139342 GSE139343
Download data: TAR
Sample
Accession:
GSM4138491
ID:
304138491
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Supplemental Content

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