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Items: 8

1.

DUX-miR-344-ZMYM2-mediated activation of MERVL LTRs induces a totipotent 2C-like state [LSD1 ChIP-seq]

(Submitter supplied) Mouse embryonic stem cells (ESCs) sporadically express preimplantation two-cell-stage (2C) transcripts, including MERVL endogenous retrovirus and Zscan4 cluster genes. Such 2C-like cells (2CLCs) can contribute to both embryonic and extraembryonic tissues when reintroduced into early embryos. We examined global nucleosome occupancy and gene expression in 2CLCs and identified miR-344 as the noncoding molecule that positively controls 2CLC potency. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL21103
6 Samples
Download data: BED
Series
Accession:
GSE142280
ID:
200142280
2.

Illumina HiSeq 4000 (Mus musculus)

Platform
Accession:
GPL21103
ID:
100021103
3.

ChIP-seq.CCE-KO_LSD1_C

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL21103
Series:
GSE119820 GSE142280
Download data: BED
Sample
Accession:
GSM4224368
ID:
304224368
4.

ChIP-seq.CCE-KO_LSD1_A

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL21103
Series:
GSE119820 GSE142280
Download data: BED
Sample
Accession:
GSM4224367
ID:
304224367
5.

ChIP-seq.CCE-KO_Input

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL21103
Series:
GSE119820 GSE142280
Download data
Sample
Accession:
GSM4224366
ID:
304224366
6.

ChIP-seq.CCE-WT_LSD1_C

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL21103
Series:
GSE119820 GSE142280
Download data: BED
Sample
Accession:
GSM4224365
ID:
304224365
7.

ChIP-seq.CCE-WT_LSD1_A

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL21103
Series:
GSE119820 GSE142280
Download data: BED
Sample
Accession:
GSM4224364
ID:
304224364
8.

ChIP-seq.CCE-WT_Input

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL21103
Series:
GSE119820 GSE142280
Download data
Sample
Accession:
GSM4224363
ID:
304224363
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Supplemental Content

db=gds|term=GSE142280[Accession]|query=1|qty=2|blobid=MCID_679479bdf521160690601d8b|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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