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Items: 15

1.

Mapping of epigenetic marks (H3K4me1, H3K4me3, H3K27ac), p300/CBP, PolII and CTCF on MDA-MB-231 genome

(Submitter supplied) In the article "Fra-1 regulates its target genes via binding to remote enhancers without exerting major control on chromatin architecture in triple negative breast cancers" by Bejjani et al., we mapped epigenetic marks (H3K4me1, H3K4me3, H3K27ac), p300/CBP, PolII and CTCF to characterize the binding sites of Fra-1 and Fra-2 on MDA-MB-231 genome. Data for Fra-1 and Fra-2 ChIP-seq are available on GEO database, accession number GSE132098 (Tolza et al., 2019, MCR 17, 1999-2014)
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL16791
13 Samples
Download data: BED, WIG
Series
Accession:
GSE146822
ID:
200146822
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

CTCF_2

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407536
ID:
304407536
4.

CTCF_1

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407535
ID:
304407535
5.

Pol II_2

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407534
ID:
304407534
6.

Pol II_1

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407533
ID:
304407533
7.

p300/CBP

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407532
ID:
304407532
8.

H3K27ac_2

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407531
ID:
304407531
9.

H3K27ac_1

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407530
ID:
304407530
10.

H3K4me3_2

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407529
ID:
304407529
11.

H3K4me3_1

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407528
ID:
304407528
12.

H3K4me1_2

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407527
ID:
304407527
13.

H3K4me1_1

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407526
ID:
304407526
14.

Input_2

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407525
ID:
304407525
15.

Input_1

Organism:
Homo sapiens
Source name:
MDA-MB-231 cell line
Platform:
GPL16791
Series:
GSE146822 GSE146825
Download data
Sample
Accession:
GSM4407524
ID:
304407524
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Supplemental Content

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