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Items: 1 to 20 of 36

1.

Naïve human embryonic stem cells can give rise to cells with trophoblast-like transcriptome and methylome [RNA-Seq]

(Submitter supplied) Human embryonic stem cells (hESCs) readily differentiate to somatic or germ lineages but have impaired ability to form extra-embryonic lineages such as placenta or yolk sac. Here we demonstrate that hESCs cultured in naïve media conditions can be converted into cells that exhibit the cellular and molecular phenotypes of human trophoblast stem cells (hTSCs) derived from human placenta or blastocyst. The resulting “transdifferentiated” hTSCs show reactivation of core placental genes, acquisition of a placenta-like methylome, and the ability to differentiate to extravillous trophoblasts and syncytiotrophoblasts. Modest differences are observed between transdifferentiated and placental hTSCs, most notably in the expression of certain imprinted loci. These results indicate that naïve hESCs can differentiate to extra-embryonic lineage, and demonstrate a new way of modeling human trophoblast specification and placental methylome establishment.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL20301 GPL24676
33 Samples
Download data: TXT
2.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
3.

Illumina HiSeq 4000 (Homo sapiens)

Platform
Accession:
GPL20301
ID:
100020301
4.

UCLA1 tdhTSC Line 1 Rep 2

Organism:
Homo sapiens
Source name:
UCLA1 tdhTSC Line 1
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603147
ID:
304603147
5.

UCLA1 tdhTSC Line 1 Rep 1

Organism:
Homo sapiens
Source name:
UCLA1 tdhTSC Line 1
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603146
ID:
304603146
6.

WIBR3 tdhTSC Line 3 Rep 1

Organism:
Homo sapiens
Source name:
WIBR3 tdhTSC Line 3
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603145
ID:
304603145
7.

WIBR3 tdhTSC Line 2 Rep 2

Organism:
Homo sapiens
Source name:
WIBR3 tdhTSC Line 2
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603144
ID:
304603144
8.

WIBR3 tdhTSC Line 1 Rep 2

Organism:
Homo sapiens
Source name:
WIBR3 tdhTSC Line 1
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603142
ID:
304603142
9.

WIBR3 tdhTSC Line 1 Rep 1

Organism:
Homo sapiens
Source name:
WIBR3 tdhTSC Line 1
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603141
ID:
304603141
10.

WIBR3 Naive hESCs Rep 2

Organism:
Homo sapiens
Source name:
WIBR3 Naive hESCs
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603140
ID:
304603140
11.

WIBR3 Primed hESCs Rep 4

Organism:
Homo sapiens
Source name:
WIBR3 Primed hESCs
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603138
ID:
304603138
12.

CT3 hTSCs Rep4

Organism:
Homo sapiens
Source name:
CT3 hTSCs
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603131
ID:
304603131
13.

CT3 hTSCs Rep3

Organism:
Homo sapiens
Source name:
CT3 hTSCs
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603130
ID:
304603130
14.

CT1 hTSCs Rep7

Organism:
Homo sapiens
Source name:
CT1 hTSCs
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603127
ID:
304603127
15.

CT1 hTSCs Rep6

Organism:
Homo sapiens
Source name:
CT1 hTSCs
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603126
ID:
304603126
16.

CT1 hTSCs Rep5

Organism:
Homo sapiens
Source name:
CT1 hTSCs
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603125
ID:
304603125
17.

BT2 hTSC Rep4

Organism:
Homo sapiens
Source name:
BT2 hTSC
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603120
ID:
304603120
18.

BT2 hTSC Rep3

Organism:
Homo sapiens
Source name:
BT2 hTSC
Platform:
GPL20301
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603119
ID:
304603119
19.

Hec116

Organism:
Homo sapiens
Source name:
Hec116
Platform:
GPL24676
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603149
ID:
304603149
20.

FT190

Organism:
Homo sapiens
Source name:
FT190
Platform:
GPL24676
Series:
GSE152101 GSE152104
Download data
Sample
Accession:
GSM4603148
ID:
304603148
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