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Items: 18

1.

Subtype-Specific and Structure Variation-Induced Chromatin Spatial Reorganization in Acute Myeloid Leukemia [ATAC-Seq]

(Submitter supplied) Acute myeloid leukemia (AML) is a set of heterogeneous myeloid malignancies hallmarked by mutations in epigenetic modifiers, transcription factors and kinases that can cause epigenetic reshaping. It is unclear whether those mutations drive chromatin 3D structure alteration and contribute to oncogenic dysregulation in AML. By performing Hi-C and whole genome sequencing in 21 primary AML and healthy donors’ samples, we identified recurrent AML- or subtype-specific alteration of compartments, TADs, and chromatin loops. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL20301
16 Samples
Download data: BIGWIG, TXT
Series
Accession:
GSE152134
ID:
200152134

PubMed Full text in PMC Similar studies

2.

Illumina HiSeq 4000 (Homo sapiens)

Organism:
Homo sapiens
8597 Series
197113 Samples
Download data
Platform
Accession:
GPL20301
ID:
100020301

3.

990_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604270
ID:
304604270

4.

027_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604269
ID:
304604269

5.

168_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604268
ID:
304604268

6.

1360_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604267
ID:
304604267

7.

472_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604266
ID:
304604266

8.

1916_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604265
ID:
304604265

9.

546_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604264
ID:
304604264

10.

260_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604263
ID:
304604263

11.

018_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604262
ID:
304604262

12.

566_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604261
ID:
304604261

13.

773_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604260
ID:
304604260

14.

270_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604259
ID:
304604259

15.

629_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary AML
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604258
ID:
304604258

16.

673_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary Healthy donor
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604257
ID:
304604257

17.

103_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary Healthy donor
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604256
ID:
304604256

18.

576_ATAC-seq

Organism:
Homo sapiens
Source name:
Primary Healthy donor
Platform:
GPL20301
Series:
GSE152134 GSE152136
Download data: BIGWIG, TXT
Sample
Accession:
GSM4604255
ID:
304604255

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