GSE4393[Accession] - GEO DataSets - NCBI

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Select item 2000043931.

Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast

(Submitter supplied) Abstract: Genes encoding RNA-binding proteins are diverse and abundant in eukaryotic genomes. Although some have been shown to have roles in post-transcriptional regulation of the expression of specific genes, few of these proteins have been studied systematically. We have used an affinity tag to isolate each of the five members of the Puf family of RNA-binding proteins in Saccharomyces cerevisiae and DNA microarrays to comprehensively identify the associated mRNAs. more...

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array

Platforms:: GPL3270 GPL3269 GPL3300
27 Samples

Series

Accession:: GSE4393

ID:: 200004393

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000033002.

(Submitter supplied) Material is transferred from microtiter plate wells to the slide surface by an automated print head

Organism:: Saccharomyces cerevisiae

3 Series
20 Samples

Platform

Accession:: GPL3300

ID:: 100003300

Select item 1000032703.

(Submitter supplied) Material is transferred from microtiter plate wells to the slide surface by an automated print head

Organism:: Saccharomyces cerevisiae

3 Series
10 Samples

Platform

Accession:: GPL3270

ID:: 100003270

Select item 1000032694.

(Submitter supplied) Material is transferred from microtiter plate wells to the slide surface by an automated print head

Organism:: Saccharomyces cerevisiae

3 Series
7 Samples

Platform

Accession:: GPL3269

ID:: 100003269

Select item 3000905275.

Organism:: Saccharomyces cerevisiae

Source name:: tot. RNA Puf3 (ex2) (channel 1) IP-RNA Puf3 (2) (channel 2)

Platform:: GPL3270
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90527

ID:: 300090527

Select item 3000905226.

Organism:: Saccharomyces cerevisiae

Source name:: tot. RNA Puf3 (ex) (channel 1) IP RNA Puf3 (1) (channel 2)

Platform:: GPL3270
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90522

ID:: 300090522

Select item 3000905427.

Puf3_delta vs. WT, SC_glycerol (2)

Organism:: Saccharomyces cerevisiae

Source name:: BY4741 tot. RNA, SC_glycerol (2) (channel 1) Puf3_delta tot. RNA, SC_glycerol (2) (channel 2)

Platform:: GPL3300
Series:: GSE3969 GSE4393

Sample

Accession:: GSM90542

ID:: 300090542

Select item 3000905418.

Puf3_delta vs. WT, SC_glycerol (1)

Organism:: Saccharomyces cerevisiae

Source name:: BY4741 tot. RNA (1) (channel 1) Puf3_delta tot. RNA (1) (channel 2)

Platform:: GPL3300
Series:: GSE3969 GSE4393

Sample

Accession:: GSM90541

ID:: 300090541

Select item 3000905409.

Puf3_delta vs. WT, SC_glycerol (3)

Organism:: Saccharomyces cerevisiae

Source name:: BY4741 tot. RNA, SC_glycerol (3) (channel 1) Puf3_delta tot. RNA, SC_glycerol (3) (channel 2)

Platform:: GPL3300
Series:: GSE3969 GSE4393

Sample

Accession:: GSM90540

ID:: 300090540

Select item 30009053910.

Organism:: Saccharomyces cerevisiae

Source name:: Puf2 tot. RNA extract (3) (channel 1) Puf2 RNA-IP (3) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90539

ID:: 300090539

Select item 30009053811.

BY4741 mock (1)

Organism:: Saccharomyces cerevisiae

Source name:: BY4741 tot. RNA extract (1) (channel 1) BY4741 RNA-IP (1) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90538

ID:: 300090538

Select item 30009053712.

Organism:: Saccharomyces cerevisiae

Source name:: Puf3 tot. RNA extract (4) (channel 1) Puf3 RNA-IP (4) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90537

ID:: 300090537

Select item 30009053613.

Organism:: Saccharomyces cerevisiae

Source name:: Puf2 tot. RNA extract (4) (channel 1) Puf2 RNA-IP (4) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90536

ID:: 300090536

Select item 30009053514.

Organism:: Saccharomyces cerevisiae

Source name:: Puf5 tot. RNA extract (4) (channel 1) Puf5 RNA-IP (4) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90535

ID:: 300090535

Select item 30009053415.

Organism:: Saccharomyces cerevisiae

Source name:: Puf2 tot. RNA extract (2) (channel 1) Puf2 RNA-IP (2) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90534

ID:: 300090534

Select item 30009053316.

Organism:: Saccharomyces cerevisiae

Source name:: Puf5 tot. RNA extract (3) (channel 1) Puf5 RNA-IP (3) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90533

ID:: 300090533

Select item 30009053217.

Organism:: Saccharomyces cerevisiae

Source name:: Puf3 tot. RNA extract (3) (channel 1) Puf3 RNA-IP (3) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90532

ID:: 300090532

Select item 30009053118.

Organism:: Saccharomyces cerevisiae

Source name:: Puf1 tot. RNA extract (3) (channel 1) Puf1 RNA-IP (3) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90531

ID:: 300090531

Select item 30009053019.

Organism:: Saccharomyces cerevisiae

Source name:: Puf1 tot. RNA extract (4) (channel 1) Puf1 RNA-IP (4) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90530

ID:: 300090530

Select item 30009052920.

BY4741 mock (4)

Organism:: Saccharomyces cerevisiae

Source name:: BY4741 tot. RNA extract (4) (channel 1) BY4741 RNA-IP (4) (channel 2)

Platform:: GPL3300
Series:: GSE3968 GSE4393

Sample

Accession:: GSM90529

ID:: 300090529

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