GSE62152[Accession] - GEO DataSets - NCBI

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Items: 12

Select item 2000621521.

Transcript 5'-end mapping was used to identify transcriptional start sites and RNA processing sites genome-wide in Mycobacterium tuberculosis

(Submitter supplied) Most eukaryotic mRNAs are enzymatically processed before they are translated, but less is known about mRNA processing in prokaryotes. While bacterial rRNAs and tRNAs are known to be highly processed, only a handful of bacterial mRNAs have been shown to be processed by ribonucleases, typically altering transcript stability. We hypothesized that mRNA processing might be more widespread in prokaryotes and constitute a previously underappreciated layer of post-transcriptional regulation. more...

Organism:: Mycobacterium tuberculosis

Type:: Expression profiling by high throughput sequencing; Other

Platforms:: GPL19272 GPL15138
9 Samples

Download data: TXT

Series

Accession:: GSE62152

ID:: 200062152

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000192722.

Illumina MiSeq (Mycobacterium tuberculosis)

Organism:: Mycobacterium tuberculosis

3 Series
12 Samples

Platform

Accession:: GPL19272

ID:: 100019272

Select item 1000151383.

Illumina Genome Analyzer IIx (Mycobacterium tuberculosis)

Organism:: Mycobacterium tuberculosis

5 Series
22 Samples

Platform

Accession:: GPL15138

ID:: 100015138

Select item 3015204414.

wildtype H37Rv experiment 2 replicate 3

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_3_2014

Platform:: GPL19272
Series:: GSE62152

Sample

Accession:: GSM1520441

ID:: 301520441

SRA Run Selector

Select item 3015204405.

wildtype H37Rv experiment 2 replicate 2

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_2_2014

Platform:: GPL19272
Series:: GSE62152

Sample

Accession:: GSM1520440

ID:: 301520440

SRA Run Selector

Select item 3015204396.

wildtype H37Rv experiment 2 replicate 1

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_1_2014

Platform:: GPL19272
Series:: GSE62152

Sample

Accession:: GSM1520439

ID:: 301520439

SRA Run Selector

Select item 3015204387.

wildtype H37Rv experiment 1 replicate 2 5' end mapping library without triphosphate conversion

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_2_2012_TSS_non-converted

Platform:: GPL15138
Series:: GSE62152

Sample

Accession:: GSM1520438

ID:: 301520438

SRA Run Selector

Select item 3015204378.

wildtype H37Rv experiment 1 replicate 2 5' end mapping library with triphosphate conversion

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_2_2012__TSS_converted

Platform:: GPL15138
Series:: GSE62152

Sample

Accession:: GSM1520437

ID:: 301520437

SRA Run Selector

Select item 3015204369.

wildtype H37Rv experiment 1 replicate 2 expression library

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_2_2012_expression

Platform:: GPL15138
Series:: GSE62152

Download data: TXT

Sample

Accession:: GSM1520436

ID:: 301520436

SRA Run Selector

Select item 30152043510.

wildtype H37Rv experiment 1 replicate 1 5' end mapping library without triphosphate conversion

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_1_2012_TSS_non-converted

Platform:: GPL15138
Series:: GSE62152

Sample

Accession:: GSM1520435

ID:: 301520435

SRA Run Selector

Select item 30152043411.

wildtype H37Rv experiment 1 replicate 1 5' end mapping library with triphosphate conversion

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_1_2012__TSS_converted

Platform:: GPL15138
Series:: GSE62152

Sample

Accession:: GSM1520434

ID:: 301520434

SRA Run Selector

Select item 30152043312.

wildtype H37Rv experiment 1 replicate 1 expression library

Organism:: Mycobacterium tuberculosis

Source name:: H37Rv_rep_1_2012_expression

Platform:: GPL15138
Series:: GSE62152

Download data: TXT

Sample

Accession:: GSM1520433

ID:: 301520433

SRA Run Selector

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