GSE6262[Accession] - GEO DataSets - NCBI

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Select item 2000062621.

Genome Position and Gene Amplification

(Submitter supplied) Amplifications, regions of focal high level copy number change, lead to overexpression of oncogenes or drug resistance genes in tumors. Their presence is often associated with poor prognosis; however the use of amplification as a mechanism for overexpression of a particular gene in tumors varies. To investigate the influence of genome position on propensity to amplify, we integrated a mutant form of DHFR into different positions in the human genome, challenged cells with methotrexate and then studied the genomic alterations arising in drug resistant cells. more...

Organism:: Homo sapiens

Type:: Genome variation profiling by genome tiling array

Platform:: GPL4421
95 Samples

Download data: TIFF, TXT

Series

Accession:: GSE6262

ID:: 200006262

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000044212.

UCSF HumArray 3.1

(Submitter supplied) The arrays contain 2464 BAC clones printed as triplicate spots and are described in: Snijders AM, Nowak N, Segraves R, et al. Assembly of microarrays for genome-wide measurement of DNA copy number. Nature Genetics 2001; 29:263-264. Protocol: http://cancer.ucsf.edu/array

Organism:: Homo sapiens

3 Series
161 Samples

Platform

Accession:: GPL4421

ID:: 100004421

PubMed Similar studies

Select item 3001442003.

Organism:: Homo sapiens

Source name:: 1M-57_5 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

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Sample

Accession:: GSM144200

ID:: 300144200

Select item 3001441994.

Organism:: Homo sapiens

Source name:: 1M-57_2 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144199

ID:: 300144199

Select item 3001441985.

Organism:: Homo sapiens

Source name:: 1M-42_2 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144198

ID:: 300144198

Select item 3001441966.

Organism:: Homo sapiens

Source name:: 1M-89_c6a (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144196

ID:: 300144196

Select item 3001441947.

Organism:: Homo sapiens

Source name:: 1M-89_16a (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144194

ID:: 300144194

Select item 3001441938.

Organism:: Homo sapiens

Source name:: 1M-89_12 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144193

ID:: 300144193

Select item 3001441909.

Organism:: Homo sapiens

Source name:: 1M-89_7 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144190

ID:: 300144190

Select item 30014418910.

Organism:: Homo sapiens

Source name:: 1M-89_6 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144189

ID:: 300144189

Select item 30014418811.

Organism:: Homo sapiens

Source name:: 1M-89_4a (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144188

ID:: 300144188

Select item 30014418712.

Organism:: Homo sapiens

Source name:: 1M-89_3 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144187

ID:: 300144187

Select item 30014418613.

Organism:: Homo sapiens

Source name:: 1M-89_2 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144186

ID:: 300144186

Select item 30014418514.

Organism:: Homo sapiens

Source name:: 1M-89_1a (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144185

ID:: 300144185

Select item 30014418415.

Organism:: Homo sapiens

Source name:: 1M-89 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144184

ID:: 300144184

Select item 30014418316.

Organism:: Homo sapiens

Source name:: 1M-84 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144183

ID:: 300144183

Select item 30014418217.

Organism:: Homo sapiens

Source name:: 1M-84_c11a (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144182

ID:: 300144182

Select item 30014418118.

Organism:: Homo sapiens

Source name:: 1M-84_c1 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144181

ID:: 300144181

Select item 30014417919.

Organism:: Homo sapiens

Source name:: 1M-84_8a (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144179

ID:: 300144179

Select item 30014417820.

Organism:: Homo sapiens

Source name:: 1M-84_6 (channel 1) Reference genomic DNA (channel 2)

Platform:: GPL4421
Series:: GSE6262

Download data: TIFF, TXT

Sample

Accession:: GSM144178

ID:: 300144178

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