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Items: 1 to 20 of 33

1.

Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer [ChIP-seq]

(Submitter supplied) Acetylation of the histone variant H2A.Z (H2A.Zac) occurs at active promoters and is associated with oncogene activation in prostate cancer, but its role in enhancer function is still poorly understood. Here we show that H2A.Zac containing nucleosomes are commonly redistributed to neo-enhancers in cancer resulting in a concomitant gain of chromatin accessibility and ectopic gene expression. Notably incorporation of acetylated H2A.Z nucleosomes is a pre-requisite for activation of Androgen receptor (AR) associated enhancers. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
4 related Platforms
28 Samples
Download data: BED, BW
Series
Accession:
GSE76336
ID:
200076336

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina NextSeq 500 (Homo sapiens)

Organism:
Homo sapiens
12611 Series
343897 Samples
Download data
Platform
Accession:
GPL18573
ID:
100018573

3.

Illumina HiSeq 2500 (Homo sapiens)

Organism:
Homo sapiens
12223 Series
349703 Samples
Download data
Platform
Accession:
GPL16791
ID:
100016791

4.

Illumina HiSeq 2000 (Homo sapiens)

Organism:
Homo sapiens
10560 Series
183756 Samples
Download data
Platform
Accession:
GPL11154
ID:
100011154

5.

Illumina Genome Analyzer II (Homo sapiens)

Organism:
Homo sapiens
755 Series
6121 Samples
Download data
Platform
Accession:
GPL9115
ID:
100009115

6.

H2AZac_ChIPseq_VCaP_DHT_16hr

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL18573
Series:
GSE76336 GSE76337
Download data: BW
Sample
Accession:
GSM2641101
ID:
302641101

SRA Run Selector

7.

H2AZac_ChIPseq_VCaP_Ethanol

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL18573
Series:
GSE76336 GSE76337
Download data: BW
Sample
Accession:
GSM2641100
ID:
302641100

SRA Run Selector

8.

H2AZac_ChIPseq_VCaP_input

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL18573
Series:
GSE76336 GSE76337
Download data: BW
Sample
Accession:
GSM2641099
ID:
302641099

SRA Run Selector

9.

H2AZac_ChIPseq_VCaP_rep2

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL18573
Series:
GSE76336 GSE76337
Download data: BED, BW
Sample
Accession:
GSM2641098
ID:
302641098

SRA Run Selector

10.

H2AZac_ChIPseq_VCaP_rep1

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL18573
Series:
GSE76336 GSE76337
Download data: BED, BW
Sample
Accession:
GSM2641097
ID:
302641097

SRA Run Selector

11.

H3K36Me3_ChIPseq_LNCaP

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data
Sample
Accession:
GSM2060774
ID:
302060774

SRA Run Selector

12.

H3K36Me3_ChIPseq_PrEC

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data
Sample
Accession:
GSM2060773
ID:
302060773

SRA Run Selector

13.

H3K4Me1_ChIPseq_PrEC_rep1

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data
Sample
Accession:
GSM2060769
ID:
302060769

SRA Run Selector

14.

H2AZac_ChIPseq_LNCaP_rep2

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data: BED, BW
Sample
Accession:
GSM1981420
ID:
301981420

SRA Run Selector

15.

H2AZac_ChIPseq_PrEC_rep2

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data: BED, BW
Sample
Accession:
GSM1981418
ID:
301981418

SRA Run Selector

16.

H2AZ_ChIPseq_LNCaP_rep1

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data: BED, BW
Sample
Accession:
GSM1981415
ID:
301981415

SRA Run Selector

17.

H2AZ_ChIPseq_PrEC_rep1

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data: BED, BW
Sample
Accession:
GSM1981413
ID:
301981413

SRA Run Selector

18.

H3K9K14ac_ChIPseq_LNCaP

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL11154
Series:
GSE76336 GSE76337
Download data
Sample
Accession:
GSM2060772
ID:
302060772

SRA Run Selector

19.

H3K9K14ac_ChIPseq_PrEC

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL11154
Series:
GSE76336 GSE76337
Download data
Sample
Accession:
GSM2060771
ID:
302060771

SRA Run Selector

20.

H3K4Me1_ChIPseq_PrEC_rep2

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL11154
Series:
GSE76336 GSE76337
Download data
Sample
Accession:
GSM2060770
ID:
302060770

SRA Run Selector

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