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1.

ChIP-chip analysis of RNAP and Sigma factor binding to the Salmonella enterica serovar Typhimurium chromosome

(Submitter supplied) ChIP-chip analysis of RNA Polymerase (RNAP), RpoD, RpoE, RpoH and RpoN in exponential phase (OD 0.2) and early stationary phase (OD 2.0) Salmonella enterica serovar Typhimurium SL1344 cultures
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Typhimurium
Type:
Genome binding/occupancy profiling by array
Platform:
GPL10008
20 Samples
Download data: TXT
Series
Accession:
GSE97283
ID:
200097283
2.

Oxford Gene Technology Chip2 Salmonella typhimurium microarray SL1344 strain product code: 010021

(Submitter supplied) 60bp oligonucleotide probes spaced approximately 60bp apart throughout the genome (42,021 for the genome, additional probes for the three plasmids). Probes were evenly distributed between strands. Probes were synthesised on the glass surface by ink jet printer which deposits phosphoramidites onto the glass (ink-jet in-situ synthesis) followed by coupling and repeat of the cycle. Probes are spotted onto standard 1 by 3 microscope slides with four arrays per slide.
Organism:
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
8 Series
67 Samples
Download data
Platform
Accession:
GPL10008
ID:
100010008
3.

RPON_STAT_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560921
ID:
302560921
4.

RPON_STAT_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560918
ID:
302560918
5.

RPOH_STAT_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560916
ID:
302560916
6.

RPOH_STAT_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560913
ID:
302560913
7.

RPOE_STAT_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560911
ID:
302560911
8.

RPOE_STAT_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560908
ID:
302560908
9.

RPOD_STAT_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560905
ID:
302560905
10.

RPOD_STAT_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560902
ID:
302560902
11.

RPON_EXP_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560900
ID:
302560900
12.

RPON_EXP_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560897
ID:
302560897
13.

RPOH_EXP_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560894
ID:
302560894
14.

RPOH_EXP_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560892
ID:
302560892
15.

RPOE_EXP_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560890
ID:
302560890
16.

RPOE_EXP_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560887
ID:
302560887
17.

RPOD_EXP_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560885
ID:
302560885
18.

RPOD_EXP_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560882
ID:
302560882
19.

RNAP_STAT_BR2

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560880
ID:
302560880
20.

RNAP_STAT_BR1

Organism:
Salmonella enterica subsp. enterica serovar Typhimurium
Source name:
ChIP DNA from SL1344 cells (channel 1) Input DNA from SL1344 (channel 2)
Platform:
GPL10008
Series:
GSE97283
Download data: TXT
Sample
Accession:
GSM2560877
ID:
302560877
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Supplemental Content

db=gds|term=GSE97283[Accession]|query=1|qty=3|blobid=MCID_679917c83ebf211704f348ea|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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