GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing

Platforms:

GPL9377 GPL7070

185 Samples

Download data: BAR, CEL, WIG

(Submitter supplied) Nucleosomes in all eukaryotes examined to date adopt a characteristic architecture within genes and play fundamental roles in regulating transcription, yet the identity and precise roles of many of the trans-acting factors responsible for the establishment and maintenance of this organization remain to be identified. We profiled a compendium of 50 yeast strains carrying conditional alleles or complete deletions of genes involved in transcriptional regulation, histone biology and chromatin remodeling, as well as compounds that target transcription and histone deacetylases, to assess their respective roles in nucleosome positioning and transcription. more...

Organism:

Saccharomyces cerevisiae

Type:

Genome binding/occupancy profiling by genome tiling array

Platform:

GPL7070

107 Samples

Download data: BAR, CEL

(Submitter supplied) The platform contains 25 nucleotide probes spaced every 8 bp covering one strand of the whole /Saccharomyces cerevisiae/ genome sequence and a second set of probes offset 4 bp from the first set to cover the other strand. Lee et al. (2007) Nature Genetics 39: 1235-1244. Protocol: see manufacturer's web site

Organism:

Saccharomyces cerevisiae

8 Series

190 Samples

Download data: TXT