GSM1141832[Accession] - GEO DataSets

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Items: 3

Select item 2000469491.

Epigenetic and genetic influences on DNA methylation variation in maize populations

(Submitter supplied) DNA methylation is a chromatin modification that is frequently associated with epigenetic regulation in plants and mammals. However, other genetic changes such as transposon insertions also can lead to changes in DNA methylation levels. Genome-wide profiles of DNA methylation levels for 20 maize inbreds were used to discover differentially methylated regions (DMRs). The methylation level for each of these DMRs was also assayed in 31 additional maize genotypes resulting in the discovery of 1,966 common DMRs and 1,754 rare DMRs. more...

Organism:: Zea mays

Type:: Methylation profiling by genome tiling array

Platforms:: GPL15621 GPL17181 GPL13499
86 Samples

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Accession:: GSE46949

ID:: 200046949

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000156212.

NimbleGen 3x1.4M Maize Methylation Array

(Submitter supplied) Design name: 110325_Zea_mays_NS_CGH Design ID: 550571 Native array description file: 110325_Zea_mays_NS_CGH.ndf Native array description file: 110325_Zea_mays_NS_CGH.pos Coordinates based on the B73 reference genome v2 physical positions (assembly RefGen_v2). Array was designed using probes initially found on the Maize 2.1M array platform (GPL13499). Probes were selected by being single-copy sequences within the maize RefGen_v2 masked genomic sequence. more...