GSM1309567[Accession] - GEO DataSets

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Items: 4

Select item 2000542191.

Molecular genomic and transcriptomic profiling of familial breast cancer.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by array; Genome variation profiling by SNP array

Platforms:: GPL570 GPL3720 GPL3718
395 Samples

Download data: CEL

Series

Accession:: GSE54219

ID:: 200054219

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000541932.

Proper genomic profiling of (BRCA1-mutated) basal-like breast carcinomas requires prior removal of tumor infiltrating lymphocytes

(Submitter supplied) To find BRCA1-associated copy number abberations, the copy number profiles of Familial Basal-like BRCA1-mutated breast carcinomas were compared to Familial Basal-like carcinomas with no pathgogenic BRCA1/2 mutation. This led to the observation of unanticipated heterogeneity of the BRCA1 associated copy number profiles. Gene expression analysis on the same samples identified tumor infiltrating lymphocytes to be responsible for this observation. more...

Organism:: Homo sapiens

Type:: Genome variation profiling by SNP array

Platforms:: GPL3720 GPL3718
240 Samples

Download data: CEL

Series

Accession:: GSE54193

ID:: 200054193

PubMed Full text in PMC Similar studies

Select item 1000037183.

[Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Mapping 500K Array Set provides consistently high coverage across different populations. It is comprised of two arrays, each capable of genotyping on average 250,000 SNPs (approximately 262,000 for Nsp arrays and 238,000 for Sty arrays). more...