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Items: 3

1.

Argonaute proteins affect siRNA levels and accumulation of a novel extrachromosomal DNA from the Dictyostelium retrotransposon DIRS-1

(Submitter supplied) We report on the function of the D. dictyostelium argonaute proteins AgnA and AgnB in the silencing mechanism of the retrotransposon DIRS-1. By deep sequencing analysis we found that AgnA is involved in the accumulation of DIRS-1 siRNAs since in respective knockout strains siRNAs are strongly reduced. This was verified by northern blots. Reduction of siRNAs was accompanied by increased transcript accumulation and the appearance of an extrachromosomal single stranded DIRS-1 cDNA. more...
Organism:
Dictyostelium discoideum
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL15643
4 Samples
Download data: WIG
Series
Accession:
GSE56111
ID:
200056111
2.

Illumina HiSeq 2000 (Dictyostelium discoideum)

Organism:
Dictyostelium discoideum
7 Series
89 Samples
Download data
Platform
Accession:
GPL15643
ID:
100015643
3.

dsRBD_2_KO

Organism:
Dictyostelium discoideum
Source name:
vegetative cells
Platform:
GPL15643
Series:
GSE56111
Download data: WIG
Sample
Accession:
GSM1356053
ID:
301356053
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Supplemental Content

db=gds|term=GSM1356053[Accession]|query=1|qty=2|blobid=MCID_675b9c6ac671c325552cb791|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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