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Items: 4

1.

Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing; Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing
5 related Platforms
50 Samples
Download data: BED, BEDGRAPH, BW, CEL
Series
Accession:
GSE76337
ID:
200076337
2.

Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer [ChIP-seq]

(Submitter supplied) Acetylation of the histone variant H2A.Z (H2A.Zac) occurs at active promoters and is associated with oncogene activation in prostate cancer, but its role in enhancer function is still poorly understood. Here we show that H2A.Zac containing nucleosomes are commonly redistributed to neo-enhancers in cancer resulting in a concomitant gain of chromatin accessibility and ectopic gene expression. Notably incorporation of acetylated H2A.Z nucleosomes is a pre-requisite for activation of Androgen receptor (AR) associated enhancers. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
4 related Platforms
28 Samples
Download data: BED, BW
Series
Accession:
GSE76336
ID:
200076336
3.

Illumina Genome Analyzer II (Homo sapiens)

Platform
Accession:
GPL9115
ID:
100009115
4.

H2AZac_ChIPseq_PrEC_rep2

Organism:
Homo sapiens
Source name:
Human cell line
Platform:
GPL9115
Series:
GSE76336 GSE76337
Download data: BED, BW
Sample
Accession:
GSM1981418
ID:
301981418
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