GSM212073[Accession] - GEO DataSets

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Items: 3

Select item 2000085431.

Mapping the C. elegans non-coding transcriptome with a whole genome tiling microarray

(Submitter supplied) The number of annotated protein coding genes in the genome of Caenorhabditis elegans is similar to that of other animals, but the extent of its non-protein coding transcriptome remains unknown. Expression profiling on whole genome tiling microarrays applied to a mixed stage C. elegans population verified the expression of 71% of all annotated exons. Only a small fraction (11 %) of the polyadenylated transcription is non-annotated, and appears to consist of approximately 3200 missed or alternative exons and 7800 small transcripts of unknown function (TUFs). more...

Organism:: Caenorhabditis elegans

Type:: Expression profiling by genome tiling array

Platform:: GPL5634
3 Samples

Download data: BAR, CEL, TXT

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Accession:: GSE8543

ID:: 200008543

PubMed Full text in PMC Similar studies

Select item 1000056342.

[Ce25b_MR] Affymetrix C. elegans Tiling 1.0R Array

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip C. elegans Tiling 1.0R Array is designed for identifying novel transcripts or mapping sites of protein/DNA interaction in chromatin immunoprecipitation (ChIP) experiments, or other Caenorhabditis elegans whole-genome experiments. The C. more...