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Items: 3

1.

Coop-seq: quantitative measurement of cooperative binding between transcription factors to hundreds of variants simultaneously

(Submitter supplied) Cooperative binding of transcription factors is known to be important in the regulation of many promoters and enhancers, but current methods to measure cooperativity parameters have been laborious and therefore limited to studying only a few sequence variants at a time. Coop-seq (cooperativity by sequencing) is capable of efficiently and accurately determining the cooperativity parameters for hundreds of different DNA sequences in a single experiment, which we demonstrate using members of the Sox and POU families of transcription factors. more...
Organism:
synthetic construct
Type:
Other
Platforms:
GPL15228 GPL17769
60 Samples
Download data: TXT
Series
Accession:
GSE85122
ID:
200085122
2.

Illumina MiSeq (synthetic construct)

Organism:
synthetic construct
102 Series
1233 Samples
Download data
Platform
Accession:
GPL17769
ID:
100017769
3.

Sox2R75EOct4_coopseq (POU bound)

Organism:
synthetic construct
Source name:
Synthesized DNA
Platform:
GPL17769
Series:
GSE85122
Download data
Sample
Accession:
GSM2327870
ID:
302327870
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