GSM2810165[Accession] - GEO DataSets

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Items: 3

Select item 2001049271.

Pan-genome and methylome analysis reveals the diversity of restriction/modification systems in the gut commensal Bifidobacterium breve.

(Submitter supplied) Bifidobacterium breve represents one of the most abundant (bifido)bacterial species in the gastro-intestinal tract of (breast-fed) infants, where their presence is believed to be beneficial. In the present study whole genome sequencing, employing PacBio’s Single Molecule, Real-Time (SMRT) sequencing platform, combined with comparative genome analysis allowed the most extensive genetic investigation of this taxon. more...

Organism:: Bifidobacterium breve; Bifidobacterium breve UCC2003

Type:: Genome variation profiling by array

Platforms:: GPL8878 GPL13210
66 Samples

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Series

Accession:: GSE104927

ID:: 200104927

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000132102.

Agilent-020573 Bifidobacterium breve UCC2003 Agilent 4x44k format

(Submitter supplied) Custom 4x44k microarray design of B. breve UCC2003 with three unique probes replicated 5 times per 1 kb of gene sequence. Protocol: Chemical In-situ oligonucleotide synthesis.

Organism:: Bifidobacterium breve UCC2003

7 Series
96 Samples

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Platform

Accession:: GPL13210

ID:: 100013210

Select item 3028101653.

B. breve UCC2003 grown on modified rogosa media v. B. breve NRBB53 grown on modified rogosa media.

Organism:: Bifidobacterium breve

Source name:: B. breve UCC2003 grown in Modified Rogosa until OD.600 of 0.7 (channel 1) B. breve strain grown in modified Rogosa until OD.600 of 0.7 (channel 2)