GEO DataSets

(Submitter supplied) We applied genome-wide profiling to successive salt-extracted fractions of micrococcal nuclease-treated Drosophila chromatin. Chromatin fractions extracted with 80mM or 150mM NaCl after digestion contain predominantly mononucleosomes and represent calssical 'active' chromatin. Profiles of these low-salt-soluble fractions display phased nucleosomes over transcriptionally active genes that are locally depleted of histone H3.3 and correspond closely to profiles of RNA polymerase II. more...

Organism:

Drosophila melanogaster

Type:

Genome binding/occupancy profiling by genome tiling array

Platforms:

GPL6888 GPL1322

47 Samples

Download data: BEDGRAPH, CEL, GFF, PAIR, TXT

(Submitter supplied) Tiling array using NimbleGen platform (DesignID=6473/6474/6475). FlyBase release 5.2. Complete tiling of Dmel FBr5 pseudo-chromosomes; no filtering; isothermal (target tm=76); mean probe length=53 (range=50 to 75); mean distance between probes=12; every other probe reversed. Protocol: http://www.nimblegen.com/products/chip/index.html

Organism:

Drosophila melanogaster

26 Series

129 Samples

Download data: GFF, NDF