GSM34293[Accession] - GEO DataSets

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Items: 4

Select item 2000015811.

MPSS mouse transcriptome analysis project

(Submitter supplied) MPSS mouse transcriptome analysis project. See http://www.ncbi.nlm.nih.gov/geo/info/mouse-trans.html for more details. Keywords: other

Organism:: Mus musculus

Type:: Expression profiling by MPSS

Dataset:: GDS868
Platform:: GPL1010
87 Samples

Download data: TXT

Series

Accession:: GSE1581

ID:: 200001581

Select item 8682.

MPSS transcriptome analysis project

Large scale transcriptome analysis using massively parallel signature sequencing (MPSS) technology. The focus of this project is to generate a reference tissue expression dataset for C57BL/6J.

Organism:: Mus musculus

Type:: Expression profiling by MPSS, count, 4 gender, 49 tissue sets

Platform:: GPL1010
Series:: GSE1581
87 Samples

Download data: TXT

DataSet

Accession:: GDS868

ID:: 868

GEO Profiles Analyze DataSet

Select item 1000010103.

MPSS [DpnII: Mus musculus] signature list

(Submitter supplied) MPSS signatures detected in Lynx mouse transcriptome analysis experiment. To generate a complete, annotated mouse signature database, we extracted all the possible signatures (“virtual signatures”) from the mouse genome sequence (NCBI build 33) and the mouse UniGene sequences (UniGene build #145). Each virtual signature is ranked based on its position and orientation in the original sequence. The annotation for that sequence is then assigned to the signature and the resulting signature database is used to annotate the data from the experiments, using our “TopHit” algorithm. more...