GSM363491[Accession] - GEO DataSets

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Items: 4

Select item 2000163831.

Hybrid Poplar H11-11 Systemic Herbivory Response

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Populus; Populus trichocarpa x Populus deltoides

Type:: Expression profiling by array

Platform:: GPL5921
60 Samples

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Series

Accession:: GSE16383

ID:: 200016383

Analyze with GEO2R

Select item 2000163652.

Hybrid Poplar H11-11 Systemic Herbivory Response Dataset 1

(Submitter supplied) We investigated the transcriptional response of hybrid poplar (Populus trichocarpa x deltoides) source and sink leaves to simulated herbivory (mechanical wounding plus the application of Malacosoma disstria oral secretions) over a 24 hour time course. Experiments were conducted using clonal trees under greenhouse conditions at the University of British Columbia. We used the 15.5K poplar cDNA microarray platform previously described by Ralph et al. more...

Organism:: Populus; Populus trichocarpa x Populus deltoides

Type:: Expression profiling by array

Platform:: GPL5921
54 Samples

Download data: TIFF

Series

Accession:: GSE16365

ID:: 200016365

Analyze with GEO2R

Select item 1000059213.

Treenomix poplar 15.5K cDNA microarray

(Submitter supplied) Corning UltraGaps Protocol: The 15,496 clones from 14 poplar cDNA libraries (Ralph et al., 2006) were selected based on a CAP3 assembly (Huang and Madan, 1999; 95% identity and 40 bp overlap) of ca. 37,000 high-quality 3’ ESTs (i.e. longest available EST sequence from each putative unique transcript). Following in silico selection of candidates, clones were robotically rearrayed from daughter glycerol stock 384-well plates into 96-well plates prefilled with 7% glycerol in LB + ampicillin, incubated overnight at 37°C, and checked for uniform optical density. more...

Organism:: Populus

8 Series
158 Samples

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Platform

Accession:: GPL5921

ID:: 100005921

PubMed Similar studies

Select item 3003634914.

HybridPoplar_H11-11_UntreatedControl6hSource_vs_OralSecretion6hSource_Hyb2

Organism:: Populus trichocarpa x Populus deltoides

Source name:: Hybrid poplar, oral secretion treatment for 6 hours, systemic source leaves (channel 1) Hybrid poplar, untreated control for 6 hours, systemic source leaves (channel 2)