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Items: 3

1.

RNA-RNA interactomes of Hfq and ProQ reveal overlapping and competing roles for RNA chaperones

(Submitter supplied) In many bacteria, the base pairing between most small regulatory RNAs (sRNAs) and their targets is facilitated by the Hfq RNA chaperone. However, recent studies have shown FinO-domain proteins also bind sRNAs. To compare the contributions of Hfq and the FinO-domain ProQ protein in Escherichia coli, we carried out RIL-seq, which allows global identification of two RNAs bound to the same protein. We detected hundreds of RNA pairs on ProQ. more...
Organism:
Escherichia coli K-12
Type:
Other
Platform:
GPL24570
56 Samples
Download data: BED, WIG
Series
Accession:
GSE131520
ID:
200131520

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Escherichia coli K-12)

Organism:
Escherichia coli K-12
16 Series
257 Samples
Download data
Platform
Accession:
GPL24570
ID:
100024570

3.

Tagged Hfq RNA-Seq 3_Hfq-FLAG LB 1

Organism:
Escherichia coli K-12
Source name:
MG1655 hfq-FLAG
Platform:
GPL24570
Series:
GSE131520
Download data: WIG
Sample
Accession:
GSM3785118
ID:
303785118

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db=gds|term=GSM3785118[Accession]|query=1|qty=2|blobid=MCID_677156e00bdf8a6e73d2d08f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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