GSM4274803[Accession] - GEO DataSets - NCBI

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Items: 3

Select item 2001438031.

SREBF1 coordinates with master transcription factors in regulating lipid metabolism and cancer-promoting pathways in squamous cell carcinoma

(Submitter supplied) We profiled esophageal squamous cell carcinorma (ESCC) cell lines with chromatin immunoprecipitation sequencing (ChIP-Seq). Mathematically modeling was performed to establish (super)-enhancers landscapes and inter-connected transcriptional circuitry formed by master TFs. Coregulation and cooperation between master TFs was investigated by ChIP-Seq, RNASeq, 4C-Seq and luciferase assay. Biological functions of candidate factors were evaluated by measuring cell proliferation, colony formation, cell apoptosis and xenograft growth. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL10999 GPL22790
13 Samples

Download data: BW, NARROWPEAK, TXT

Series

Accession:: GSE143803

ID:: 200143803

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000109992.

Illumina Genome Analyzer IIx (Homo sapiens)

Organism:: Homo sapiens

1102 Series
10066 Samples

Platform

Accession:: GPL10999

ID:: 100010999

Select item 3042748033.

KYSE150_SREBF1 ChIP-Seq

Organism:: Homo sapiens

Source name:: KYSE150_SREBF1 ChIP-Seq

Platform:: GPL10999
Series:: GSE143803

Download data: BW, NARROWPEAK

Sample

Accession:: GSM4274803

ID:: 304274803

SRA Run Selector

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GSM4274803[Accession] (3)
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