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Items: 4

1.

Genome-wide investigation of the dynamic changes of epigenome modifications after DNA methylation editing

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL21290 GPL16791
48 Samples
Download data: BED, BIGWIG
Series
Accession:
GSE144904
ID:
200144904
2.

Genome-wide investigation of the dynamic changes of epigenome modifications after DNA methylation editing [MBD-seq]

(Submitter supplied) The aim of this study was to investigate the stability of DNA methylation, the dynamics of different histone modifications and the changes in expression after genome-wide introduction of DNA methylation in promotor CpG islands. Therefore, the catalytic domain of DNMT3A was fused to a zinc finger protein and expressed for three days to globally introduce de novo DNA methylation and subsequently, the changes in the epigenome were monitored for up to eleven days.
Organism:
Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL21290
18 Samples
Download data: BIGWIG
Series
Accession:
GSE144331
ID:
200144331
3.

Illumina HiSeq 3000 (Homo sapiens)

Platform
Accession:
GPL21290
ID:
100021290
4.

ZnF-3AC 3d dox Rep1 MBD2 seq

Organism:
Homo sapiens
Source name:
HEK293 cell line
Platform:
GPL21290
Series:
GSE144331 GSE144904
Download data
Sample
Accession:
GSM4286068
ID:
304286068
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Supplemental Content

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