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Items: 3

1.

Nonsense Mediated mRNA decay mutes the splicing defects of spliceosome component mutations

(Submitter supplied) The role of many splicing factors in pre-mRNA splicing and the involvement of these factors in the processing of specific transcripts have often been defined through the analysis of loss of function mutants in vivo. Here we show that inactivating the nonsense mediated mRNA decay (NMD) results in an enhancement of splicing phenotypes associated with several splicing factors mutations. Tiling microarrays showed that inactivation of the NMD factor Upf1p in the prp17Δ and prp18Δ mutant strains reveals a larger spectrum of splicing defects than what is observed in the single mutants, including new transcripts previously shown unaffected by Prp17p or Prp18p inactivation. more...
Organism:
Saccharomyces cerevisiae
Type:
Other
Platform:
GPL9286
12 Samples
Download data: CEL
Series
Accession:
GSE18288
ID:
200018288
2.

Yeast 2.7M whole genome tiling array (Sc03b_MR_V04)

(Submitter supplied) Affymetrxi protocol
Organism:
Saccharomyces cerevisiae
1 Series
1 Related Platform
12 Samples
Download data: BPMAP
Platform
Accession:
GPL9286
ID:
100009286
3.

Prp17 delta Upf1 delta replicate 1

Organism:
Saccharomyces cerevisiae
Source name:
Haploid yeast cell
Platform:
GPL9286
Series:
GSE18288
Download data: CEL
Sample
Accession:
GSM456338
ID:
300456338
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db=gds|term=GSM456338[Accession]|query=1|qty=2|blobid=MCID_675bffa79a32d1611628f077|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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