GSM5526538[Accession] - GEO DataSets

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Items: 4

Select item 2001823171.

Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing; Genome variation profiling by genome tiling array; Methylation profiling by array; Other

5 related Platforms
171 Samples

Download data: HIC, IDAT, NARROWPEAK, RDS, TXT

Series

Accession:: GSE182317

ID:: 200182317

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001823122.

Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia [Array CGH]

(Submitter supplied) CCCTC-binding factor (CTCF) regulates the 3D chromatin architecture by facilitating chromosomal loops. In addition to insulation of euchromatin from heterochromatin, CTCF is an important transcription factor and regulator of antigen receptor and T cell receptor recombination events. CTCF inactivating events have been found in human cancer, resulting in deregulation of global gene expression by altered methylated genomic states. more...

Organism:: Homo sapiens

Type:: Genome variation profiling by genome tiling array

Platforms:: GPL2879 GPL9777 GPL4093
93 Samples

Download data: TXT

Series

Accession:: GSE182312

ID:: 200182312

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000097773.

Agilent-021850 SurePrint G3 Human CGH Microarray (Feature Number version)

(Submitter supplied) SurePrint G3 Human CGH Microarray 2x400K Arrays of this design have barcodes that begin with 16021850 or 2521850. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...