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Items: 3

1.

Group A Streptococcus Gene Expression in Humans with Pharyngitis Using a Microarray

(Submitter supplied) This study represents the first in vivo genome wide analysis of gene epxression of Group A Streptococcus (GAS) in humans with pharyngitis. The micorarray used is a custom microarray that relies on an electrochemical reaction as the measured signal rather than flourescence. Distinct clusters of gene expression were discovered and analyzed. A functional analysis examining differences and similarities between the clusters was performed.
Organism:
Streptococcus pyogenes M1 GAS; Streptococcus pyogenes MGAS6180; Streptococcus pyogenes MGAS2096; Streptococcus pyogenes MGAS315; Streptococcus pyogenes MGAS9429; Homo sapiens; Streptococcus pyogenes SSI-1; Streptococcus pyogenes MGAS5005; Streptococcus pyogenes MGAS10750
Type:
Expression profiling by array
Platform:
GPL10562
14 Samples
Download data: TXT
Series
Accession:
GSE22436
ID:
200022436
2.

BAMC-DCI GAS 12K ver1.0 [condensed version]

(Submitter supplied) The full array layout file provided as a supplementary file. Protocol: Probe sets were 30-40mers in length, sense strand and were selected using a Combimatrix probe selection algorithm taking into account gene (>90% BLAST score) and serotype specificity, Tm, hairpins and GC content. Arrays were constructed using the CustomArray Synthesizer at Combimatrix. CustomArray uses a specially modified CMOS semiconductor to direct the molecular assembly of a specific sequence of DNA bases in response to a digital command. more...
Organism:
Streptococcus pyogenes M1 GAS; Streptococcus pyogenes SSI-1; Streptococcus pyogenes MGAS315; Streptococcus pyogenes MGAS5005; Streptococcus pyogenes MGAS6180; Streptococcus pyogenes MGAS9429; Streptococcus pyogenes MGAS2096; Streptococcus pyogenes MGAS10750
1 Series
14 Samples
Download data: TXT
Platform
Accession:
GPL10562
ID:
100010562
3.

GASpos_sample2

Organism:
Homo sapiens
Source name:
human pharyngeal/tonsilar swab
Platform:
GPL10562
Series:
GSE22436
Download data: TXT
Sample
Accession:
GSM557530
ID:
300557530
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db=gds|term=GSM557530[Accession]|query=1|qty=10|blobid=MCID_67519c0af000e367d98594bb|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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