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Items: 3

1.

Transcriptome-wide analysis of the function of Ded1 in translation preinitiation complex assembly in a reconstituted in vitro system

(Submitter supplied) We have developed a deep sequencing-based approach, Rec-Seq, that allows simultaneous monitoring of ribosomal 48S pre-initiation complex (PIC) formation on every mRNA in the translatome in an in vitro reconstituted system. Rec-Seq isolates key early steps in translation initiation in the absence of all other cellular components and processes. Using this approach we show that the DEAD-box ATPase Ded1 promotes 48S PIC formation on the start codons of >1000 native mRNAs, most of which have long, structured 5’-untranslated regions (5’UTRs). more...
Organism:
Saccharomyces cerevisiae
Type:
Other
Platform:
GPL27812
14 Samples
Download data: WIG
Series
Accession:
GSE244093
ID:
200244093
2.

Illumina NovaSeq 6000 (Saccharomyces cerevisiae)

Organism:
Saccharomyces cerevisiae
222 Series
9345 Samples
Download data
Platform
Accession:
GPL27812
ID:
100027812
3.

Ded1-500nM_b

Organism:
Saccharomyces cerevisiae
Source name:
yeast cell
Platform:
GPL27812
Series:
GSE244093
Download data: WIG
Sample
Accession:
GSM7806550
ID:
307806550
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Supplemental Content

db=gds|term=GSM7806550[Accession]|query=1|qty=2|blobid=MCID_6750d9b08288966b395a273f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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