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Items: 3

1.

Long read subcellular fractionation and sequencing reveals the translational fate of full length mRNA isoforms during neuronal differentiation

(Submitter supplied) Alternative splicing (AS) alters the cis-regulatory landscape of mRNA isoforms leading to transcripts with distinct localization, stability and translational efficiency. To rigorously investigate mRNA isoform-specific ribosome association, we generated subcellular fractionation and sequencing (Frac-seq) libraries using both conventional short reads and long reads from human embryonic stem cells (ESC) and neural progenitor cells (NPC) derived from the same ESC. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL20301 GPL26167
40 Samples
Download data: GTF, XLSX
Series
Accession:
GSE244655
ID:
200244655

PubMed Similar studies Analyze with GEO2R

2.

PromethION (Homo sapiens)

Organism:
Homo sapiens
94 Series
777 Samples
Download data
Platform
Accession:
GPL26167
ID:
100026167

3.

NPC, long read, heavy polyribosome (5+ ribosomes), rep1

Organism:
Homo sapiens
Source name:
H9
Platform:
GPL26167
Series:
GSE244655
Download data
Sample
Accession:
GSM7823436
ID:
307823436

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db=gds|term=GSM7823436[Accession]|query=1|qty=2|blobid=MCID_677b68ab0bdf8a6e73f42a24|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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