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Items: 3

1.

scNanoSeq-CUT&Tag: a long-read single-cell CUT&Tag sequencing method for efficient chromatin modification profiling within individual cells

(Submitter supplied) We developed scNanoSeq-CUT&Tag, a streamlined method by adapting a modified CUT&Tag protocol to Oxford Nanopore sequencing platform for efficient chromatin modification profiling at single-cell resolution. We firstly tested the performance of scNanoSeq-CUT&Tag on six human cell lines: K562, 293T, GM12878, HG002, H9, HFF1 and adult mouse blood cells, it showed that scNanoSeq-CUT&Tag can accurately distinguish different cell types in vitro and in vivo. more...
Organism:
Mus musculus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL26167 GPL26624
46 Samples
Download data: BED, BEDGRAPH, BW, TXT
Series
Accession:
GSE249799
ID:
200249799

PubMed

2.

PromethION (Homo sapiens)

Organism:
Homo sapiens
93 Series
775 Samples
Download data
Platform
Accession:
GPL26167
ID:
100026167

3.

scNanoSeq-CUT&Tag_K562_H3K4me3_Millipore_04_745

Organism:
Homo sapiens
Source name:
K562
Platform:
GPL26167
Series:
GSE249799
Download data: BED, BW
Sample
Accession:
GSM7964458
ID:
307964458

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db=gds|term=GSM7964458[Accession]|query=1|qty=3|blobid=MCID_675b53fbb80ed315f1242eab|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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