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Items: 3

1.

Perturbation-Specific Transcriptional Mapping for unbiased target elucidation of antibiotics

(Submitter supplied) We developed an unbiased strategy for MOA prediction, called Perturbation-Specific Transcriptional Mapping (PerSpecTM), in which large-throughput expression profiling of wildtype or hypomorphic mutants, depleted for essential targets, enables a computational strategy to address this challenge. We applied PerSpecTM to perform reference-based MOA prediction based on the principle that similar perturbations, whether small molecule or genetic, will elicit similar transcriptional responses. more...
Organism:
Pseudomonas aeruginosa UCBPP-PA14
Type:
Expression profiling by high throughput sequencing
Platform:
GPL27892
1059 Samples
Download data: CSV
Series
Accession:
GSE251671
ID:
200251671
2.

Illumina NovaSeq 6000 (Pseudomonas aeruginosa UCBPP-PA14)

Organism:
Pseudomonas aeruginosa UCBPP-PA14
9 Series
1215 Samples
Download data
Platform
Accession:
GPL27892
ID:
100027892
3.

MOC_1430:erythro:300.00000uM:60min:PA14:MOC_1430_1:r3

Organism:
Pseudomonas aeruginosa UCBPP-PA14
Source name:
PA14
Platform:
GPL27892
Series:
GSE251671
Download data
Sample
Accession:
GSM7985086
ID:
307985086
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db=gds|term=GSM7985086[Accession]|query=1|qty=2|blobid=MCID_67490400462e1a751e1733ca|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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