GSM867142[Accession] - GEO DataSets

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Items: 4

Select item 2000353831.

INTEGRATIVE ONCOGENOMIC AND HIGH-THROUGHPUT SEQUENCING ANALYSES OF THE COMMONLY DELETED REGION IN CHROMOSOME 7q32 IN SPLENIC MARGINAL ZONE LYMPHOMA

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Genome variation profiling by array; Expression profiling by array; SNP genotyping by SNP array; Genome variation profiling by SNP array

7 related Platforms
148 Samples

Download data: CEL, TXT

Series

Accession:: GSE35383

ID:: 200035383

Select item 2000353672.

INTEGRATIVE ONCOGENOMIC AND HIGH-THROUGHPUT SEQUENCING ANALYSES OF THE COMMONLY DELETED REGION IN CHROMOSOME 7q32 IN SPLENIC MARGINAL ZONE LYMPHOMA (CGH)

(Submitter supplied) Using high-resolution genomic microarray analysis, a distinct genomic profile was defined in 114 samples from patients with splenic marginal zone lymphoma (SMZL). Notably, deletion or uniparental disomy of chromosome 7q were detected in 39% of SMZLs but in only 9 of 170 (5%) mature B-cell lymphomas (p<10-6). The presence of unmutated IgVH genes, genomic complexity, 17p13-P53 deletion and 8q gain including MYC gene, but not 7q deletion, were correlated with shorter overall survival. more...

Organism:: Homo sapiens

Type:: Genome variation profiling by array

Platforms:: GPL15168 GPL3868 GPL3869
76 Samples

Download data: TXT

Series

Accession:: GSE35367

ID:: 200035367

Select item 1000038683.

UCSF HUMAN 1.14 v2

(Submitter supplied) The arrays contain 2462 BAC clones printed as triplicated spots. The array was used for genome wide measurement of DNA copy number. Protocol: Production and validation of the array, hybridization methods and analytical procedures have been described elsewhere: Snijder AM, Nowak N, Segraves R, et al. Assembly of microarrays for genome-wide measurement of DNA copy number. Nat Genet. 2001;29:263-264.