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Items: 3

1.

Duke-UNC-Texas-EBI ENCODE expression project

(Submitter supplied) These samples are being analyzed by the Duke-UNC-Texas-EBI ENCODE consortium. Expression from these cell types will compared to three whole genome open chromatin methodologies: DNaseI hypersensitivity (DNase-seq), Formaldehyde-Assisted Isolation of Regulatory elements (FAIRE-seq), and Chromatin Immunoprecipitation (ChIP-seq) . For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL15997
155 Samples
Download data: BED, CEL
Series
Accession:
GSE15805
ID:
200015805

PubMed Full text in PMC Similar studies ENCODEAnalyze with GEO2R

2.

[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [GENCODE v10]

(Submitter supplied) Custom metaprobest definition based on the GENCODE v10 annotation (July 2011). Protocol: See manufacturer's web site
Organism:
Homo sapiens
1 Series
1 Related Platform
155 Samples
Download data: TXT
Platform
Accession:
GPL15997
ID:
100015997

3.

MCF-7_CTCF_shRNA_knockdown_B3

Organism:
Homo sapiens
Source name:
mammary gland, adenocarcinoma, CTCF knockdown using shRNA
Platform:
GPL15997
Series:
GSE15805
Download data: BED, CEL
Sample
Accession:
GSM993568
ID:
300993568

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db=gds|term=GSM993568[Accession]|query=1|qty=2|blobid=MCID_674c5272d82608403851bbd8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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