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Items: 8

1.

Dissecting the co-transcriptome landscape of plants and microbiota

(Submitter supplied) Interactions between plants and each neighboring microbial species are fundamental building blocks that collectively determine the structure and function of the plant microbiota, but the molecular basis of such interactions is poorly characterized. Here, we monocolonized Arabidopsis leaves with nine plant-associated bacteria from all major phyla of the plant microbiota and profiled co-transcriptomes of plants and bacteria. more...
Organism:
Acinetobacter sp. Leaf130; Arthrobacter sp. Soil763; Flavobacterium sp. Root935; Exiguobacterium sp. Leaf187; Arabidopsis thaliana; Pedobacter sp. Leaf176; Burkholderia sp. Leaf177; Chryseobacterium sp. Leaf404; Plantibacter sp. Leaf1; Rhizobium sp. Leaf155
Type:
Expression profiling by high throughput sequencing
10 related Platforms
125 Samples
Download data: FNA, TXT
Series
Accession:
GSE150422
ID:
200150422

SRA Run Selector

2.

Illumina HiSeq 3000 (Pedobacter sp. Leaf176)

Organism:
Pedobacter sp. Leaf176
1 Series
6 Samples
Download data
Platform
Accession:
GPL28524
ID:
100028524

3.

Leaf176_col_3 TN_B_048

Organism:
Pedobacter sp. Leaf176
Source name:
Bacteria isolated from Arabidopsis thaliana
Platform:
GPL28524
Series:
GSE150422
Download data
Sample
Accession:
GSM4550241
ID:
304550241

SRA Run Selector

4.

Leaf176_col_2 TN_B_047

Organism:
Pedobacter sp. Leaf176
Source name:
Bacteria isolated from Arabidopsis thaliana
Platform:
GPL28524
Series:
GSE150422
Download data
Sample
Accession:
GSM4550240
ID:
304550240

SRA Run Selector

5.

Leaf176_vitro_3 TN_B_039

Organism:
Pedobacter sp. Leaf176
Source name:
Bacteria isolated from Arabidopsis thaliana
Platform:
GPL28524
Series:
GSE150422
Download data
Sample
Accession:
GSM4550232
ID:
304550232

SRA Run Selector

6.

Leaf176_vitro_2 TN_B_017

Organism:
Pedobacter sp. Leaf176
Source name:
Bacteria isolated from Arabidopsis thaliana
Platform:
GPL28524
Series:
GSE150422
Download data
Sample
Accession:
GSM4550210
ID:
304550210

SRA Run Selector

7.

Leaf176_vitro_1 TN_B_016

Organism:
Pedobacter sp. Leaf176
Source name:
Bacteria isolated from Arabidopsis thaliana
Platform:
GPL28524
Series:
GSE150422
Download data
Sample
Accession:
GSM4550209
ID:
304550209

SRA Run Selector

8.

Leaf176_col_1 TN_B_004

Organism:
Pedobacter sp. Leaf176
Source name:
Bacteria isolated from Arabidopsis thaliana
Platform:
GPL28524
Series:
GSE150422
Download data
Sample
Accession:
GSM4550197
ID:
304550197

SRA Run Selector

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db=gds|term=txid1736286[Organism:noexp]|query=1|qty=11|blobid=MCID_679cb5a83ebf2117046582f5|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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