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Links from GEO DataSets

Items: 1 to 20 of 51

1.
Full record GDS772

Histone deacetylase RPD3 deletion and histone mutations effect on gene regulation

Analysis of gene regulation by expression profiling of single mutants for histone deacetylase RPD3, histones H3 and H4, and double mutants for either RPD3 and H3 or RPD3 and H4. Histone mutants defective in amino terminal tails, which are acetylated and deacetylated in transcription regulation.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 8 genotype/variation sets
Platform:
GPL90
Series:
GSE1639
18 Samples
Download data: CEL, EXP
2.
Full record GDS3591

Quinine effect on yeast eukaryotic model

Analysis of Saccharomyces cerevisiae cells subjected to anti-malaria drug quinine (QN) at concentration that exerted a very slight effect on cellular growth. Results provide insight into the molecular mechanisms underlying QN action and the host response to the drug.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 agent sets
Platform:
GPL90
Series:
GSE18037
4 Samples
Download data: CEL
3.
Full record GDS3438

Budding yeast response to hypoxia

Analysis of Saccharomyces cerevisiae wild type cells grown under reduced oxygen tension. Heme synthesis requires oxygen, and yeast grown anaerobically exhibit an increased uptake of hemin. Results provide insight into the molecular mechanisms regulating heme uptake.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 growth protocol sets
Platform:
GPL90
Series:
GSE9514
4 Samples
Download data: CEL
4.
Full record GDS3437

Budding yeast response to heme deficiency

Analysis of Saccharomyces cerevisiae mutant cells lacking aminolevulinic acid (ALA) synthase. ALA synthase catalyzes the first step of heme biosynthesis. Heme uptake is induced by heme starvation in S. cerevisiae. Results provide insight into the molecular mechanisms regulating heme uptake.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 growth protocol sets
Platform:
GPL90
Series:
GSE9514
4 Samples
Download data: CEL
5.
Full record GDS3332

Wine fermentation effect on yeast: time course

Analysis of Saccharomyces cerevisiae, strain Vin13, subjected to ethanol levels up to 10% during a 15-day wine fermentation. Results provide insight into molecular mechanisms underlying the adaptive response of yeast to the long-term environmental stresses present during alcoholic fermentation.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, transformed count, 6 stress, 7 time sets
Platform:
GPL90
Series:
GSE8536
21 Samples
Download data: CEL
6.
Full record GDS3245

S288C cell response to pterostilbene

Analysis of strain S288C cells subjected to pterostilbene at the IC50 concentration (70uM) for one generation (3h). Pterostilbene, an analog of resveratrol, is a phytoalexin exhibiting potent antifungal activity. Results provide insight into the molecular pathways affected by pterostilbene.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 agent sets
Platform:
GPL90
Series:
GSE10554
6 Samples
Download data: CEL
7.
Full record GDS3198

Abf1 DNA-binding mutant

Analysis of temperature sensitive Abf1 mutant cells subjected to a temperature of 37 degrees C to dissociate the mutant protein from its DNA binding sites. Results provide insight into the contribution of this general regulatory factor to transcription genome-wide.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 genotype/variation sets
Platform:
GPL90
Series:
GSE6073
6 Samples
Download data: CEL
8.
Full record GDS3137

Antifungal compound sampangine effect on Saccharomyces cerevisiea

Analysis of Saccharomyces cerevisiae cells treated with the antifungal compound sampangine. Sampangine exhibits strong inhibitory activity against opportunistic fungal pathogens such as Candida albicans. Using S. cerevisiae as a model, results provide insight into sampangine's mechanism of action.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 agent sets
Platform:
GPL90
Series:
GSE10073
6 Samples
Download data: CEL
9.
Full record GDS3081

not1-2 spt3 double mutant

Analysis of not1-2 spt3 double mutant cells. NOT1 encodes the scaffold subunit of the Ccr4-Not transcription factor complex. SPT3 encodes a transcription factor. The temperature sensitive not1-2 mutant exhibits transcriptional defects that are suppressed by the deletion of SPT3.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 4 genotype/variation sets
Platform:
GPL90
Series:
GSE9432
8 Samples
Download data: CEL, CHP
10.
Full record GDS3061

Ribosomal protein null mutants

Analysis of several Saccharomyces cerevisiae mutants each deficient in one of various ribosomal proteins. S. cerevisiae contains many duplicated genes encoding ribosomal proteins. Results provide insight into the unique role of each member of a pair of ribosomal protein paralogs.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 12 genotype/variation sets
Platform:
GPL90
Series:
GSE8761
24 Samples
Download data: CEL
11.
Full record GDS3035

Saccharomyces cerevisiae response to oxidative stress: time course

Analysis of Saccharomyces cerevisiae cultures at various time points up to 120 minutes following treatment with the oxidant cumene hydroperoxide (CHP). Results provide insight into molecular mechanisms underlying the response of the yeast S. cerevisiae to oxidative stress.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, transformed count, 2 agent, 8 time sets
Platform:
GPL90
Series:
GSE7645
48 Samples
Download data: CEL
12.
Full record GDS2999

Gentamicin effect on Saccharomyces cerevisiae

Analysis of Saccharomyces cerevisiae strain 4073 cultures treated with gentamicin. Gentamicin is an antibiotic used against gram-negative bacterial infections. Its usefulness is limited by nephrotoxicity. Results provide insight into the molecular mechanisms underlying gentamicin's renal toxicity.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 agent sets
Platform:
GPL90
Series:
GSE7188
8 Samples
Download data: CEL, CHP
DataSet
Accession:
GDS2999
ID:
2999
13.
Full record GDS2969

Carbon dioxide effect on fermenting yeast: dose response

Analysis of chemostat cultures sparged with 79% or 100% carbon dioxide (CO2). During fermentation and ethanol production, CO2 is produced, saturating the fermentative broth. Results provide insight into the mechanisms underlying CO2 stress.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 4 dose, 2 growth protocol sets
Platform:
GPL90
Series:
GSE8900
18 Samples
Download data: CEL, EXP
DataSet
Accession:
GDS2969
ID:
2969
14.
Full record GDS2925

Various weak organic acids effect on anaerobic yeast chemostat cultures

Analysis of anaerobic chemostat cultures of Saccharomyces cerevisae exposed to one of several weak organic acids. Weak organic acids are used as preservatives in food and beverages. Yeasts are able to proliferate at the maximum legal dosage of such preservatives.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 5 stress sets
Platform:
GPL90
Series:
GSE5926
15 Samples
Download data: CEL
DataSet
Accession:
GDS2925
ID:
2925
15.
Full record GDS2804

Quiescent stb3 null mutant response to glucose

Analysis of the response of quiescent stb3 null cells to glucose. STB3 encodes a protein that binds to the Ribosomal RNA Processing Element, a DNA sequence motif that regulates genes needed for growth. Results provide insight into Stb3’s role during the transition from quiescence to rapid growth.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, transformed count, 2 genotype/variation, 2 growth protocol sets
Platform:
GPL90
Series:
GSE8379
8 Samples
Download data: CEL
DataSet
Accession:
GDS2804
ID:
2804
16.
Full record GDS2716

Commercially prepared dry active yeast and dessicated laboratory yeast

Comparison of commercially prepared dry active yeast and desiccated preparations of the Saccharomyces cerevisiae laboratory strain BY4743. The yeast specimens were dried by different regimens. Results provide insight into the molecular response of yeast to water removal.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 specimen, 2 stress sets
Platform:
GPL90
Series:
GSE1314
9 Samples
Download data: CEL, DAT, EXP
17.
Full record GDS2715

Yeast response to dessication and subsequent rehydration (III)

Analysis of Saccharomyces cerevisiae BY4743 cells subjected to controlled air-drying and subsequent rehydration for up to 360 minutes. Results provide insight into the molecular response of yeast to water deficit.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 7 other, 3 protocol sets
Platform:
GPL90
Series:
GSE1313
21 Samples
Download data: CEL, DAT, EXP
18.
Full record GDS2713

Yeast response to dessication and subsequent rehydration (II)

Analysis of Saccharomyces cerevisiae BY4743 cells subjected to controlled air-drying and subsequent rehydration for up to 360 minutes. Results provide insight into the molecular response of yeast to water deficit.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 7 other, 3 protocol sets
Platform:
GPL90
Series:
GSE1312
21 Samples
Download data: CEL, DAT, EXP
19.
Full record GDS2712

Yeast response to dessication and subsequent rehydration (I)

Analysis of Saccharomyces cerevisiae BY4743 cells subjected to controlled air-drying and subsequent rehydration for up to 360 minutes. Results provide insight into the molecular response of yeast to water deficit.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 7 other, 3 protocol sets
Platform:
GPL90
Series:
GSE1311
21 Samples
Download data: CEL, DAT, EXP
20.
Full record GDS2663

Mre11 deficient sporulating cells

Analysis of Mre11 deficient cells at meiotic prophase during sporulation. Mre11 is important in homologous recombination, repair of DNA double strand breaks, activation of damage-induced checkpoint, and telomere maintenance. Results provide insight into the role of Mre11 in spore development.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array, count, 2 development stage, 4 genotype/variation sets
Platform:
GPL90
Series:
GSE6620
8 Samples
Download data: CEL
DataSet
Accession:
GDS2663
ID:
2663
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