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Links from GEO DataSets

Items: 10

1.

Comparison of SCOTS and standard microarray protocol

(Submitter supplied) Legionella pneumophila is the causative agent of Legionnaires’ disease, an acute pulmonary infection. L. pneumophila is able to infect and multiply in both phagocytic protozoan, such as Acanthamoeba castellanii, and mammalian professional phagocytes. The best-known virulence determinant used by L. pneumophila to infect host cells is a Type IVb translocation system named Icm/Dot, which is used to modify the host cell functions to the benefit of the bacteria. more...
Organism:
Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Type:
Expression profiling by array
Platform:
GPL7283
12 Samples
Download data
Series
Accession:
GSE23032
ID:
200023032
2.

Legionella pneumophila transcriptome during intracellular multiplication in human macrophages

(Submitter supplied) Legionella pneumophila is the causative agent of Legionnaires’ disease, an acute pulmonary infection. L. pneumophila is able to infect and multiply in both phagocytic protozoan, such as Acanthamoeba castellanii, and mammalian professional phagocytes. The best-known virulence determinant used by L. pneumophila to infect host cells is a Type IVb translocation system named Icm/Dot, which is used to modify the host cell functions to the benefit of the bacteria. more...
Organism:
Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Type:
Expression profiling by array
Platform:
GPL7283
30 Samples
Download data
Series
Accession:
GSE23029
ID:
200023029
3.

Legionella pneumophila JR32 and rpoS- (LM1367) strains: Statinoary phase (stat) vs. Logarithmic (log) phase growth

(Submitter supplied) Transcriptional profiling of L. pneumophila JR32 (wild-type) and rpoS- (LM1376) strains grown to stat phase compared to cultures grown to log phase Keywords: growth phase
Organism:
Legionella pneumophila; Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Type:
Expression profiling by array
Platform:
GPL7283
2 Samples
Download data: CSV
Series
Accession:
GSE14830
ID:
200014830
4.

The CpxRA two-component system promotes intracellular survival and is a key regulator of virulence factors in Legionella pneumophila

(Submitter supplied) The bacterium Legionella pneumophila is capable of intracellular replication within freshwater protozoa as well as human alveolar macrophages, the latter of which results in the serious pneumonia Legionnaires’ disease. A primary factor involved in these host cell interactions is the Dot/Icm Type IV secretion system that is responsible for translocating effector proteins needed to establish and maintain the bacterial replicative niche. more...
Organism:
Legionella pneumophila; Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Type:
Expression profiling by array
Platform:
GPL19458
12 Samples
Download data: TXT
Series
Accession:
GSE73873
ID:
200073873
5.

The transcriptome of Legionella pneumophila-infected human monocyte-derived macrophages

(Submitter supplied) Analysis of the human monocyte-derived macrophage (hMDM) transcriptional response to L. pneumophila infection at 8 hours post-infection We used microarrays to probe the hMDM transcriptional response to wild type L. pneumophila AA100 infection and its isogenic ankB and T2SS mutants. We identified up-regulation of innate immunity pathways and down-regulation of protein translation pathways
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL6244
12 Samples
Download data: CEL
Series
Accession:
GSE61535
ID:
200061535
6.

Strand specific sequencing illustrates the complex transcriptional response of Legionella pneumophila during infection

(Submitter supplied) Legionella pneumophila is a Gram-negative facultative intracellular human pathogen with a distinct biphasic lifestyle. One of its primary environmental hosts in the free-living amoeba Acanthamoeba castellanii and its infection by L. pneumophila mimics that seen in human macrophages. Here we present analysis of strand specific sequencing of the transcriptional response of L. pneumophila in broth growth and in infection of A. more...
Organism:
Legionella pneumophila
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13156
5 Samples
Download data: BED
Series
Accession:
GSE27232
ID:
200027232
7.

Transcriptional Response of Human Macrophages to Legionella pneumophila Infection

(Submitter supplied) Abstract Legionella pneumophila, the causative agent of Legionnaire’s disease, grows within macrophages and manipulates target cell signaling. Formation of a Legionella-containing replication vacuole requires the function of the bacterial type IV secretion system (Dot/Icm), which transfers protein substrates into the host cell cytoplasm. A global microarray analysis was used to examine the response of human macrophage-like U937 cells to low dose infections with L. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL4104
27 Samples
Download data: TXT
Series
Accession:
GSE5551
ID:
200005551
8.

Legionella pneumophila small RNAs and deletion of 6S RNA

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Type:
Expression profiling by array; Non-coding RNA profiling by array
Platforms:
GPL9531 GPL7283
66 Samples
Download data
Series
Accession:
GSE19451
ID:
200019451
9.

Gene affected by deletion of 6S RNA in post-exponential phase

(Submitter supplied) Legionella pneumophila is a gram-negative opportunistic human pathogen that infects and multiplies in a broad range of phagocytic protozoan and mammalian phagocytes. Based on the observation that small regulatory RNAs (sRNAs) play an important role in controlling virulence-related genes in several pathogenic bacteria, we attempted to test the hypothesis that sRNAs play a similar role in L. pneumophila. more...
Organism:
Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Type:
Expression profiling by array
Platform:
GPL7283
6 Samples
Download data
Series
Accession:
GSE19200
ID:
200019200
10.

Detection of predicted small RNA of Legionella pneumophila

(Submitter supplied) Legionella pneumophila is a gram-negative opportunistic human pathogen that infects and multiplies in a broad range of phagocytic protozoan and mammalian phagocytes. Based on the observation that small regulatory RNAs (sRNAs) play an important role in controlling virulence-related genes in several pathogenic bacteria, we attempted to test the hypothesis that sRNAs play a similar role in L. pneumophila. more...
Organism:
Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Type:
Non-coding RNA profiling by array
Platform:
GPL9531
60 Samples
Download data
Series
Accession:
GSE19196
ID:
200019196
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