Similar studies for GEO DataSets (Select 200086463) - GEO DataSets

Select item 2000864631.

The IKK complex requires Morgana to drive NF-kB dependent breast cancer metastatisation

(Submitter supplied) Identification of Morgana associated gene expression by comparing morgana knockdown (MDA-sh1/2) and control (MDA-1/2) MDA-MB-231 cells.

Organism:: Homo sapiens

Type:: Expression profiling by array

Platform:: GPL14550
4 Samples

Download data: TXT

Series

Accession:: GSE86463

ID:: 200086463

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000575392.

lncRNA and mRNA expression of cytokine treated MDA-MB-231 cells

(Submitter supplied) MDA-MB-231 cells were treated with PBS, LPS, IL1b, TNFa, IL6, and TGFb respectively and expression profile were assayed by Arraystar human lncRNA array 2.0

Organism:: Homo sapiens

Type:: Expression profiling by array; Non-coding RNA profiling by array

Platform:: GPL15314
6 Samples

Download data: TXT

Series

Accession:: GSE57539

ID:: 200057539

Select item 2001135383.

Comparison between MCF7-IKKe overexpressing cells and MCF7 control cells

(Submitter supplied) Analysis of differentially expressed genes in MCF7 cancer cells transiently transfected with an expression vector containing the ORF of IKKe and as a control, cells were transfected with a vector containing the ORF of Lacz.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18573
6 Samples

Download data: TXT

Series

Accession:: GSE113538

ID:: 200113538

Select item 2002489384.

RBM7 regulates breast cancer progression

(Submitter supplied) In order to profile the alternative splicing events that were regulated by RBM7, RNA-seq was performed on MDA-MB-231 cells which was used to generate RBM7 stably depleted breast cancer cells. And to explore how RBM7 regulated splicing target MFGE8, MDA-MB-231 cells stably overexpressed respectively MFGE8 long isoform (MFGE8-L) and short isoform (MFGE8-S) that were used for RNA-sequence.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24676
6 Samples

Download data: XLSX

Series

Accession:: GSE248938

ID:: 200248938

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001856475.

CECR2 Drives Breast Cancer Metastasis by Suppressing Macrophage Inflammatory Responses

(Submitter supplied) Purpose: Metastasis are responsible for the most majority of cancer-related deaths due to the lack of effective targeted therapies. Therefore, specific targets which tackle that complex process are needed to improve the therapeutic outcomes of metastatic breast cancer. Methods: ATAC-Seq analysis of CECR2 knockout and control LM2 cells. Results: CECR2 knockout regulate chromatin accessibility of NF-kB target genes . more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL20301
4 Samples

Download data: BED, BW, TXT

Series

Accession:: GSE185647

ID:: 200185647

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001480056.

Acetyl-lysine Reader CECR2 Drives Breast Cancer Metastasis by Coordinating Macrophage Polarization and Immune Suppression

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL11154 GPL16791
32 Samples

Download data

Series

Accession:: GSE148005

ID:: 200148005

PubMed Full text in PMC Similar studies

Select item 2001479957.

Acetyl-lysine Reader CECR2 Drives Breast Cancer Metastasis by Coordinating Macrophage Polarization and Immune Suppression [metastasis]

(Submitter supplied) Purpose: Advanced breast cancer leads to significantly higher mortality due to metastasis. The goal of this work is to screen and study the deregulated epigenetic regulators to identify the novel targets for the treatment of metastatic breast cancer. Methods:RNA-Seq analysis of matched primary and metastatic breast samples to detect the deregulated epigenetic regulators. Live imaging system was applied to modulate metastatic tumor growth in vivo. more...